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UGID:914210     UniGene Hs.523463     Homo sapiens (human)   RPL27A
Ribosomal protein L27a (RPL27A)

Human protein-coding gene RPL27A. Represented by 2499 ESTs from 497 cDNA libraries. Corresponds to reference sequence NM_000990.4. [UniGene 914210 - Hs.523463]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001029256.1 RPL27A gene product P. troglodytes 100.0 147
NP_000981.1 RPL27A gene product H. sapiens 100.0 147
XP_004023064.1 PREDICTED: 60S ribosomal protein L27a-like O. aries 100.0 147
NP_036105.2 Rpl27a gene product M. musculus 98.0 147
NP_001080189.1 ribosomal protein L27a X. laevis 93.2 147
NP_956324.1 zgc:77235 gene product D. rerio 91.9 147
NP_476963.1 ribosomal protein L27A, isoform A D. melanogaster 77.7 147
NP_490927.1 Protein Y37E3.8, isoform a C. elegans 77.2 144
XP_001699654.1 ribosomal protein L27a, component of cytosolic 80S ribosome and 60S large subunit C. reinhardtii 72.1 146
NP_173743.1 60S ribosomal protein L27a-2 A. thaliana 71.9 145
NP_011412.1 ribosomal 60S subunit protein L28 S. cerevisiae 63.8 148
XP_961195.2 60S ribosomal protein L28 N. crassa 63.1 148
Other hits (2 of 63) [Show all]SpeciesId(%)Len(aa)
XP_001097365.1 PREDICTED: 60S ribosomal protein L27a-like isoform 1 M. mulatta 99.3 147
NP_001239154.1 RPL27A gene product C. lupus familiaris 98.7 147

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: prostate; lung; brain; intestine; embryonic tissue; mixed; heart; skin; uterus; liver; eye; kidney; uncharacterized tissue; pancreas; testis; ovary; lymph; placenta; connective tissue; mammary gland; lymph node; bone marrow; bone; umbilical cord; muscle; vascular; blood; tonsil; trachea; pharynx; pineal gland; ascites; thymus; stomach; ear; mouth; parathyroid; salivary gland; adrenal gland; spleen; larynx; cervix; bladder; spinal cord; thyroid; pituitary gland; esophagus; adipose tissue; nerve
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 11
Map position: 11p15
UniSTS entry: Chr 11 GDB:451637
UniSTS entry: Chr 11 D11S4394
UniSTS entry: Chr 11 MARC_1767-1768:991931306:1
UniSTS entry: Chr 11 FB22B6
UniSTS entry: Chr 11 SGC31250 [Map Viewer]
UniSTS entry: Chr 11 T03647
UniSTS entry: Chr 1 PMC156606P2
UniSTS entry: Chr 1 PMC156606P3
UniSTS entry: Chr 1 PMC156606P4
UniSTS entry: Chr 1 D8S2278
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

AK125453.1 Homo sapiens cDNA FLJ43464 fis, clone OCBBF2036225 A
NM_000990.4 Homo sapiens ribosomal protein L27a (RPL27A), mRNA PA
BC066326.1 Homo sapiens ribosomal protein L27a, mRNA (cDNA clone MGC:87238 IMAGE:5311530), complete cds PA
BC005326.1 Homo sapiens ribosomal protein L27a, mRNA (cDNA clone MGC:12412 IMAGE:4052417), complete cds PA
BC004284.1 Homo sapiens, clone IMAGE:3617175, mRNA A
BC014919.1 Homo sapiens ribosomal protein L27a, mRNA (cDNA clone IMAGE:3906869) A
BC020169.1 Homo sapiens, clone IMAGE:3543815, mRNA, partial cds PA
AK311767.1 Homo sapiens cDNA, FLJ92028, Homo sapiens ribosomal protein L27a (RPL27A), mRNA P
U14968.1 Human ribosomal protein L27a mRNA, complete cds P

EST sequences (10 of 2499) [Show all sequences]

AA954119.1 Clone IMAGE:1591241 kidney 3' read
AA954934.1 Clone IMAGE:1574434 kidney 3' read PA
AA836786.1 Clone IMAGE:1422616 kidney P
AA961800.1 Clone IMAGE:1598413 uncharacterized tissue 3' read P
AA968710.1 Clone IMAGE:1601121 uncharacterized tissue 3' read PA
AA968869.1 Clone IMAGE:1573853 kidney 3' read PA
AA970289.1 Clone IMAGE:1575221 kidney 3' read PA
AA971869.1 Clone IMAGE:1584779 lung 3' read P
AA972368.1 Clone IMAGE:1584645 lung 3' read P
AA973219.1 Clone IMAGE:1597374 uncharacterized tissue 3' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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