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UGID:913675     UniGene Hs.522928     Homo sapiens (human)   VSTM4
V-set and transmembrane domain containing 4 (VSTM4)

Human protein-coding gene VSTM4. Represented by 178 ESTs from 87 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 913675 - Hs.522928]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001026916.2 VSTM4 gene product H. sapiens 100.0 319
NP_848906.1 V-set and transmembrane domain-containing protein 4 precursor M. musculus 88.6 316
XP_002664062.2 PREDICTED: sc:d805 D. rerio 47.9 311
Other hits (2 of 16) [Show all]SpeciesId(%)Len(aa)
XP_001138161.1 PREDICTED: V-set and transmembrane domain-containing protein 4 isoform 1 P. troglodytes 99.4 319
XP_001107966.1 PREDICTED: uncharacterized Ig-like domain-containing protein C10orf72-like M. mulatta 97.8 319

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; lung; uncharacterized tissue; mixed; prostate; kidney; pancreas; embryonic tissue; heart; adrenal gland; connective tissue; eye; testis; parathyroid; intestine; mammary gland; ear; placenta; thymus; trachea; ovary; thyroid; adipose tissue; skin; uterus; muscle; bone; stomach; mouth
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 10
Map position: 10q11.23
UniSTS entry: Chr 10 D10S2381
UniSTS entry: Chr 10 SHGC-132546
UniSTS entry: Chr 10 SHGC-35721
UniSTS entry: Chr 10 RH48264 [Map Viewer]
UniSTS entry: Chr 10 SHGC-56414
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (10)

AL080114.1 Homo sapiens mRNA; cDNA DKFZp586M2022 (from clone DKFZp586M2022) A
AK001062.1 Homo sapiens cDNA FLJ10200 fis, clone HEMBA1004863, highly similar to Homo sapiens mRNA; cDNA DKFZp586M2022
AK021993.1 Homo sapiens cDNA FLJ11931 fis, clone HEMBB1000480
NM_001031746.3 Homo sapiens V-set and transmembrane domain containing 4 (VSTM4), transcript variant 1, mRNA P
AK056299.1 Homo sapiens cDNA FLJ31737 fis, clone NT2RI2007084 P
NM_144984.2 Homo sapiens V-set and transmembrane domain containing 4 (VSTM4), transcript variant 2, mRNA P
AL833529.1 Homo sapiens mRNA; cDNA DKFZp686K2137 (from clone DKFZp686K2137) A
AK297931.1 Homo sapiens cDNA FLJ50814 complete cds P
BC017010.1 Homo sapiens, clone IMAGE:4447682, mRNA A
BC041414.1 Homo sapiens chromosome 10 open reading frame 72, mRNA (cDNA clone MGC:44086 IMAGE:5285468), complete cds PA

EST sequences (10 of 178) [Show all sequences]

AA972338.1 Clone IMAGE:1584540 lung 3' read A
AI027151.1 Clone IMAGE:1649524 parathyroid 3' read
AI042102.1 Clone IMAGE:1664945 skin 3' read A
AI123312.1 Clone IMAGE:1689960 mixed 3' read A
AI127432.1 Clone IMAGE:1705915 heart 3' read
AI127523.1 Clone IMAGE:1711104 uterus 3' read A
AI161256.1 Clone IMAGE:1703463 brain 3' read A
BX119016.1 Clone IMAGp998P054185_;_IMAGE:1649524 parathyroid
AI183625.1 Clone IMAGE:1740261 lung 3' read
AI241338.1 Clone IMAGE:1869234 kidney 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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