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UGID:913386     UniGene Hs.522639     Homo sapiens (human)   SUV39H1
Suppressor of variegation 3-9 homolog 1 (Drosophila) (SUV39H1)

Human protein-coding gene SUV39H1. Represented by 244 ESTs from 136 cDNA libraries. Corresponds to reference sequence NM_003173.2. [UniGene 913386 - Hs.522639]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001099361.1 PREDICTED: histone-lysine N-methyltransferase SUV39H1 isoform 1 M. mulatta 100.0 422
XP_003917723.1 PREDICTED: histone-lysine N-methyltransferase SUV39H1 isoform 2 P. anubis 100.0 422
NP_003164.1 SUV39H1 gene product H. sapiens 100.0 411
XP_548987.2 PREDICTED: histone-lysine N-methyltransferase SUV39H1 C. lupus familiaris 99.8 411
NP_001039729.1 SUV39H1 gene product B. taurus 99.8 411
XP_002719912.1 PREDICTED: suppressor of variegation 3-9 homolog 1-like O. cuniculus 99.8 393
XP_521048.4 PREDICTED: histone-lysine N-methyltransferase SUV39H1-like, partial P. troglodytes 99.7 341
XP_004022156.1 PREDICTED: LOW QUALITY PROTEIN: histone-lysine N-methyltransferase SUV39H1 O. aries 99.5 422
NP_035644.1 Suv39h1 gene product M. musculus 96.8 411
NP_001084892.1 histone-lysine N-methyltransferase SUV39H1 X. laevis 85.3 420
NP_001119954.1 suv39h1b gene product D. rerio 79.1 420
NP_524357.2 suppressor of variegation 3-9 D. melanogaster 53.3 284
Other hits (2 of 30) [Show all]SpeciesId(%)Len(aa)
NP_001100426.1 histone-lysine N-methyltransferase SUV39H1 R. norvegicus 96.8 412
XP_003214053.1 PREDICTED: histone-lysine N-methyltransferase SUV39H1-like, partial M. gallopavo 92.0 136

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; uncharacterized tissue; mixed; lung; placenta; uterus; eye; stomach; vascular; heart; bone marrow; mouth; kidney; mammary gland; testis; lymph node; skin; blood; cervix; embryonic tissue; spleen; thymus; intestine; liver; ovary; lymph; prostate; muscle; connective tissue; pancreas; ascites; bone; adrenal gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: X
Map position: Xp11.23
UniSTS entry: Chr X DXS7466E
UniSTS entry: Chr X WI-18178 [Map Viewer]
UniSTS entry: Chr X PMC24455P1
UniSTS entry: Chr X DXS8281
UniSTS entry: Chr X DXS9868E
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (11)

NM_003173.2 Homo sapiens suppressor of variegation 3-9 homolog 1 (Drosophila) (SUV39H1), mRNA PA
CR541746.1 Homo sapiens full open reading frame cDNA clone RZPDo834E0729D for gene SUV39H1, suppressor of variegation 3-9 homolog 1 (Drosophila); complete cds, incl. stopcodon P
AK223071.1 Homo sapiens mRNA for suppressor of variegation 3-9 homolog 1 variant, clone: KAT02327 P
BC006238.2 Homo sapiens suppressor of variegation 3-9 homolog 1 (Drosophila), mRNA (cDNA clone MGC:10376 IMAGE:3945632), complete cds PA
AK312547.1 Homo sapiens cDNA, FLJ92918, Homo sapiens suppressor of variegation 3-9 homolog 1 (Drosophila)(SUV39H1), mRNA P
AK298233.1 Homo sapiens cDNA FLJ51508 complete cds P
AK299900.1 Homo sapiens cDNA FLJ57812 complete cds, highly similar to Histone-lysine N-methyltransferase, H3 lysine-9 specific 1 (EC 2.1.1.43) P
AK297566.1 Homo sapiens cDNA FLJ51507 complete cds, highly similar to Histone-lysine N-methyltransferase, H3lysine-9 specific 1 (EC 2.1.1.43) P
AF075109.1 Homo sapiens full length insert cDNA YU40D04 A
L08238.1 Human MG44 mRNA, 5' end P
AF019968.1 Homo sapiens Su(var)3-9 homolog (SUV39H) mRNA, complete cds PA

EST sequences (10 of 244) [Show all sequences]

AI024518.1 Clone IMAGE:1631383 mammary gland 3' read A
AI032406.1 Clone IMAGE:1639553 testis 3' read
BX094167.1 Clone IMAGp998P171858_;_IMAGE:755968 ovary A
CB134504.1 Clone L5HLK1-25-D10 liver 5' read
CB149041.1 Clone L15CKK1-39-D02 liver 5' read
CB215427.1 Clone IMAGE:5937262 uterus 5' read
R51754.1 Clone IMAGE:38929 brain 5' read P
AI499687.1 Clone IMAGE:2165494 brain 3' read A
AI628407.1 Clone IMAGE:2284975 kidney 3' read A
AI656983.1 Clone IMAGE:2244672 uncharacterized tissue 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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