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UGID:909542     UniGene Hs.518795     Homo sapiens (human)   C4orf40
Chromosome 4 open reading frame 40 (C4orf40)

Human protein-coding gene C4orf40. Represented by 60 ESTs from 5 cDNA libraries. EST representation biased toward muscle; adult. Corresponds to reference sequence NM_214711.3. [UniGene 909542 - Hs.518795]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_999876.2 uncharacterized protein C4orf40 precursor H. sapiens 100.0 218
Other hits (2 of 3) [Show all]SpeciesId(%)Len(aa)
XP_001161016.1 PREDICTED: uncharacterized protein C4orf40 homolog isoform 1 P. troglodytes 97.3 218
XP_001106644.2 PREDICTED: hypothetical protein LOC708016 M. mulatta 87.2 218

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: muscle [show more like this]
adult [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: muscle; eye; testis; mixed; mammary gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 4
Map position: 4q13.3
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (12)

BX537828.1 Homo sapiens mRNA; cDNA DKFZp686P24256 (from clone DKFZp686P24256) A
BX648896.1 Homo sapiens mRNA; cDNA DKFZp686N08252 (from clone DKFZp686N08252) PA
BX648895.1 Homo sapiens mRNA; cDNA DKFZp686P06247 (from clone DKFZp686P06247) PA
BX648881.1 Homo sapiens mRNA; cDNA DKFZp686I10243 (from clone DKFZp686I10243) A
BX648872.1 Homo sapiens mRNA; cDNA DKFZp686O17243 (from clone DKFZp686O17243) PA
BX648724.1 Homo sapiens mRNA; cDNA DKFZp686F01248 (from clone DKFZp686F01248) PA
BX647185.1 Homo sapiens mRNA; cDNA DKFZp686H07244 (from clone DKFZp686H07244) PA
BX647183.1 Homo sapiens mRNA; cDNA DKFZp686A15244 (from clone DKFZp686A15244) PA
BX640997.1 Homo sapiens mRNA; cDNA DKFZp686N12252 (from clone DKFZp686N12252) PA
BX640924.1 Homo sapiens mRNA; cDNA DKFZp686M02252 (from clone DKFZp686M02252) PA
BX640892.1 Homo sapiens mRNA; cDNA DKFZp686O20248 (from clone DKFZp686O20248) PA
NM_214711.3 Homo sapiens chromosome 4 open reading frame 40 (C4orf40), mRNA PA

EST sequences (10 of 60) [Show all sequences]

CB985971.1 Clone IMAGE:30328470 mixed 5' read
CB957562.1 Clone IMAGE:30352440 mixed 5' read P
CB958709.1 Clone IMAGE:30351662 mixed 5' read
BX484273.1 Clone DKFZp686A18242 muscle 5' read P
BX484274.1 Clone DKFZp686A18242 muscle 3' read A
BX484363.1 Clone DKFZp686I18242 muscle 5' read P
BX484444.1 Clone DKFZp686A01243 muscle 5' read P
BX484657.1 Clone DKFZp686O14243 muscle 5' read
BX484937.1 Clone DKFZp686C19245 muscle 5' read P
BX485403.1 Clone DKFZp686A05247 muscle 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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