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UGID:907555     UniGene Hs.516808     Homo sapiens (human)   PDE6D
Phosphodiesterase 6D, cGMP-specific, rod, delta (PDE6D)

Human protein-coding gene PDE6D. Represented by 184 ESTs from 103 cDNA libraries. Corresponds to reference sequence NM_002601.2. [UniGene 907555 - Hs.516808]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001144711.1 PREDICTED: retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta P. troglodytes 100.0 149
NP_002592.1 PDE6D gene product H. sapiens 100.0 149
NP_032827.1 Pde6d gene product M. musculus 98.7 149
NP_001002708.1 pde6d gene product D. rerio 92.7 149
NP_495490.1 Protein PDL-1 C. elegans 71.6 148
NP_609246.1 Prenyl-binding protein D. melanogaster 66.2 150
Other hits (2 of 37) [Show all]SpeciesId(%)Len(aa)
XP_001113642.1 PREDICTED: retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta-like M. mulatta 99.3 149
XP_003908129.1 PREDICTED: retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta P. anubis 99.3 149

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; bone; lymph node; kidney; skin; mixed; uncharacterized tissue; embryonic tissue; placenta; eye; larynx; cervix; stomach; blood; lung; intestine; pancreas; bone marrow; mammary gland; lymph; ovary; liver; uterus; vascular; muscle; thymus; connective tissue; salivary gland; prostate; spleen; adrenal gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 2
Map position: 2q35-q36
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

BT007278.1 Homo sapiens phosphodiesterase 6D, cGMP-specific, rod, delta mRNA, complete cds P
NM_002601.2 Homo sapiens phosphodiesterase 6D, cGMP-specific, rod, delta (PDE6D), mRNA PA
CR456980.1 Homo sapiens full open reading frame cDNA clone RZPDo834C115D for gene PDE6D, phosphodiesterase 6D, cGMP-specific, rod, delta; complete cds, incl. stopcodon P
BC007831.2 Homo sapiens phosphodiesterase 6D, cGMP-specific, rod, delta, mRNA (cDNA clone MGC:14096 IMAGE:3638562), complete cds PA
AK311623.1 Homo sapiens cDNA, FLJ18665
BC017467.1 Homo sapiens phosphodiesterase 6D, cGMP-specific, rod, delta, mRNA (cDNA clone IMAGE:3909733) PA
BC001054.2 Homo sapiens phosphodiesterase 6D, cGMP-specific, rod, delta, mRNA (cDNA clone IMAGE:3509221) PA
AF022912.1 Homo sapiens cGMP phosphodiesterase delta subunit mRNA, complete cds PA
AJ001626.1 Homo sapiens mRNA for p17 protein P

EST sequences (10 of 184) [Show all sequences]

AA905303.1 Clone IMAGE:1506155 mixed 3' read A
AA993925.1 Clone IMAGE:1628832 mixed 3' read
AA906591.1 Clone IMAGE:1524216 mixed 3' read A
AI093832.1 Clone IMAGE:1688254 mixed 3' read A
AI096583.1 Clone IMAGE:1702973 brain 3' read A
AI096799.1 Clone IMAGE:1704151 brain 3' read A
AI149803.1 Clone IMAGE:1752761 testis 3' read
AI150457.1 Clone IMAGE:1752569 testis 3' read A
BX089429.1 Clone IMAGp998M081851_;_IMAGE:753199 mixed P
AI216406.1 Clone IMAGE:1843863 mixed 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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