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UGID:905902     UniGene Hs.515155     Homo sapiens (human)   C19orf43
Chromosome 19 open reading frame 43 (C19orf43)

Human protein-coding gene C19orf43. Represented by 553 ESTs from 237 cDNA libraries. Corresponds to reference sequence NM_024038.2. [UniGene 905902 - Hs.515155]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001108705.1 PREDICTED: uncharacterized protein C19orf43-like isoform 2 M. mulatta 100.0 175
XP_003915033.1 PREDICTED: uncharacterized protein C19orf43 homolog P. anubis 100.0 175
XP_512412.1 PREDICTED: uncharacterized protein C19orf43 homolog isoform 2 P. troglodytes 100.0 175
NP_076943.1 C19orf43 gene product H. sapiens 100.0 175
NP_081036.2 uncharacterized protein C19orf43 homolog M. musculus 95.4 172
XP_684751.1 PREDICTED: uncharacterized protein C19orf43-like isoform 1 D. rerio 60.3 140
Other hits (2 of 9) [Show all]SpeciesId(%)Len(aa)
XP_002724143.1 PREDICTED: hypothetical protein O. cuniculus 97.7 176
XP_003123371.1 PREDICTED: uncharacterized protein C19orf43-like S. scrofa 97.2 177

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; intestine; mammary gland; lung; embryonic tissue; mixed; uncharacterized tissue; prostate; eye; pancreas; uterus; tonsil; lymph node; bladder; thymus; larynx; lymph; bone; blood; heart; pharynx; vascular; skin; ovary; testis; stomach; placenta; muscle; kidney; cervix; salivary gland; connective tissue; thyroid; ascites; bone marrow; liver; pituitary gland; umbilical cord; spleen
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 19
Map position: 19p13.2
UniSTS entry: Chr 19 D1S3567
UniSTS entry: Chr 19 RH16594
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (8)

BC000216.2 Homo sapiens chromosome 19 open reading frame 43, mRNA (cDNA clone MGC:2803 IMAGE:2961319), complete cds PA
AF061732.1 Homo sapiens clone 017d02 My029 protein mRNA, complete cds
NM_024038.2 Homo sapiens chromosome 19 open reading frame 43 (C19orf43), mRNA PA
BC004533.2 Homo sapiens chromosome 19 open reading frame 43, mRNA (cDNA clone MGC:2964 IMAGE:3139656), complete cds PA
BC015347.1 Homo sapiens chromosome 19 open reading frame 43, mRNA (cDNA clone MGC:21372 IMAGE:4156774), complete cds PA
AK315754.1 Homo sapiens cDNA, FLJ96865 P
AK027588.1 Homo sapiens cDNA FLJ14682 fis, clone NT2RP2004463 PA
BC040846.1 Homo sapiens chromosome 19 open reading frame 43, mRNA (cDNA clone IMAGE:4394494) PA

EST sequences (10 of 553) [Show all sequences]

AA976082.1 Clone IMAGE:1558437 lung 3' read A
AA989507.1 Clone IMAGE:1606282 kidney 3' read
AI039470.1 Clone IMAGE:1658878 embryonic tissue 3' read A
AI130687.1 Clone IMAGE:1709363 heart 3' read
BX098504.1 Clone IMAGp998D11172_;_IMAGE:40843 brain
AI190201.1 Clone IMAGE:1731657 heart 3' read
AI268159.1 Clone IMAGE:1911620 lung 3' read A
AI203528.1 Clone IMAGE:1732422 heart 3' read
AI245051.1 Clone IMAGE:1869595 kidney 3' read
AI274498.1 Clone IMAGE:1986085 uterus 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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