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UGID:905303     UniGene Hs.514556     Homo sapiens (human)   NPTX1
Neuronal pentraxin I (NPTX1)

Human protein-coding gene NPTX1. Represented by 155 ESTs from 47 cDNA libraries. Corresponds to reference sequence NM_002522.3. [UniGene 905303 - Hs.514556]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_523739.2 PREDICTED: neuronal pentraxin-1 isoform 2 P. troglodytes 100.0 431
NP_002513.2 NPTX1 gene product H. sapiens 100.0 431
XP_001110666.2 PREDICTED: neuronal pentraxin-1-like M. mulatta 99.8 431
XP_003913589.1 PREDICTED: neuronal pentraxin-1 P. anubis 99.8 431
NP_032756.1 Nptx1 gene product M. musculus 97.5 431
NP_001091445.2 neuronal pentraxin 1 precursor X. laevis 86.4 434
NP_998101.1 nptx1l gene product D. rerio 84.5 419
Other hits (2 of 18) [Show all]SpeciesId(%)Len(aa)
NP_001179283.1 NPTX1 gene product B. taurus 98.2 431
XP_003131182.2 PREDICTED: neuronal pentraxin-1-like S. scrofa 97.7 431

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; lung; testis; eye; uncharacterized tissue; prostate; muscle; mixed; connective tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 17
Map position: 17q25.3
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (5)

BX537550.1 Homo sapiens mRNA; cDNA DKFZp686J2446 (from clone DKFZp686J2446) P
AK127335.1 Homo sapiens cDNA FLJ45406 fis, clone BRHIP3030230, highly similar to Neuronal pentraxin-1 precursor P
NM_002522.3 Homo sapiens neuronal pentraxin I (NPTX1), mRNA P
BC089441.1 Homo sapiens neuronal pentraxin I, mRNA (cDNA clone MGC:105123 IMAGE:30555728), complete cds PA
U61849.1 Human neuronal pentraxin 1 (NPTX1) mRNA, complete cds P

EST sequences (10 of 155) [Show all sequences]

AI124625.1 Clone IMAGE:1539867 brain 3' read P
CB051379.1 Clone IMAGE:3289317 prostate 3' read A
CB051380.1 Clone IMAGE:3289317 prostate 5' read A
AI222008.1 Clone IMAGE:1842933 mixed 3' read P
T08921.1 Clone HIBBM27 brain 5' read
BX459509.2 Clone CS0DF001YF19 brain 5' read
BX459510.2 Clone CS0DF001YF19 brain 5' read
BX476337.1 Clone DKFZp686J21185 muscle 5' read A
AL119012.1 Clone DKFZp761K04121 brain 5' read
CF128345.1 Clone IMAGE:30555728 lung 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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