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UGID:904926     UniGene Hs.514179     Homo sapiens (human)   FOPNL
FGFR1OP N-terminal like (FOPNL)

Human protein-coding gene FOPNL. Represented by 386 ESTs from 167 cDNA libraries. Corresponds to reference sequence NM_144600.2. [UniGene 904926 - Hs.514179]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_653201.1 FOPNL gene product H. sapiens 100.0 173
XP_001165748.1 PREDICTED: lisH domain-containing protein FOPNL-like, partial P. troglodytes 100.0 93
NP_079621.1 Fopnl gene product M. musculus 92.5 173
XP_696350.3 PREDICTED: lisH domain-containing protein C16orf63 homolog D. rerio 69.7 145
NP_001090045.1 lisH domain-containing protein FOPNL X. laevis 64.7 167
Other hits (2 of 20) [Show all]SpeciesId(%)Len(aa)
XP_003916644.1 PREDICTED: lisH domain-containing protein FOPNL P. anubis 98.3 173
XP_001109724.2 PREDICTED: lisH domain-containing protein C16orf63-like M. mulatta 94.4 107

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; mixed; lymph node; heart; stomach; intestine; uterus; skin; kidney; placenta; vascular; lung; liver; uncharacterized tissue; blood; prostate; embryonic tissue; adipose tissue; muscle; mammary gland; pituitary gland; eye; esophagus; bone marrow; spinal cord; connective tissue; ovary; thyroid; pancreas; mouth; parathyroid; thymus; trachea; bone; umbilical cord; pharynx; cervix; ascites
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 16
Map position: 16p13.11
UniSTS entry: Chr 16 RH65019
UniSTS entry: Chr 16 RH93586
UniSTS entry: Chr 16 RH65060
UniSTS entry: Chr 1 D1S1425
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

AY507846.1 Homo sapiens pluripotent embryonic stem cell-related protein (PHSECRG2) mRNA, complete cds PA
AK056798.1 Homo sapiens cDNA FLJ32236 fis, clone PLACE6004931
AK055715.1 Homo sapiens cDNA FLJ31153 fis, clone IMR322001600 P
BC022321.1 Homo sapiens chromosome 16 open reading frame 63, mRNA (cDNA clone MGC:22646 IMAGE:4702249), complete cds PA
NM_144600.2 Homo sapiens FGFR1OP N-terminal like (FOPNL), mRNA P
AL832498.1 Homo sapiens mRNA; cDNA DKFZp686N1651 (from clone DKFZp686N1651) PA

EST sequences (10 of 386) [Show all sequences]

AA977587.1 Clone IMAGE:1561151 mixed 3' read PA
AA904444.1 Clone IMAGE:1507171 mixed 3' read A
AI032004.1 Clone IMAGE:1650828 parathyroid 3' read
AI052445.1 Clone IMAGE:1674674 mixed 3' read
AI066761.1 Clone IMAGE:1638402 testis 3' read P
AI093249.1 Clone IMAGE:1695273 uterus 3' read A
AI084565.1 Clone IMAGE:1660983 mixed 3' read A
AI129800.1 Clone IMAGE:1712956 uterus 3' read A
AI129801.1 Clone IMAGE:1712960 uterus 3' read A
BX102874.1 Clone IMAGp998P04384_;_IMAGE:200307 mixed A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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