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UGID:902745     UniGene Hs.511998     Homo sapiens (human)   SSX6
Synovial sarcoma, X breakpoint 6 (pseudogene) (SSX6)

Human pseudo gene SSX6. Represented by 4 ESTs from 4 cDNA libraries. Corresponds to reference sequence NR_028366.1. [UniGene 902745 - Hs.511998]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_003917703.1 PREDICTED: putative protein SSX6-like P. anubis 87.2 187
NP_005626.1 SSX1 gene product H. sapiens 81.4 187
Other hits (SpeciesId(%)Len(aa)
XP_002806266.1 PREDICTED: protein SSX8-like isoform 2 M. mulatta 83.5 187
XP_003317518.2 PREDICTED: LOW QUALITY PROTEIN: protein SSX8-like P. troglodytes 83.5 187

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: bone marrow; testis; ascites; prostate
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: X
Map position: Xp11.2
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (2)

AK302765.1 Homo sapiens cDNA FLJ53113 complete cds, highly similar to Protein SSX6 P
NR_028366.1 Homo sapiens synovial sarcoma, X breakpoint 6 (pseudogene) (SSX6), non-coding RNA PA

EST sequences (4)

BF173737.1 bone marrow
DC402469.1 Clone TESTI4028415 testis 5' read P
BM835112.1 Clone S11SNU1-55-G09 ascites 5' read P
AA552200.1 Clone IMAGE:999650 prostate


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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