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UGID:726117     UniGene Hs.510958     Homo sapiens (human)   AQR
Aquarius homolog (mouse) (AQR)

Human protein-coding gene AQR. Represented by 303 ESTs from 157 cDNA libraries. Corresponds to reference sequence NM_014691.2. [UniGene 726117 - Hs.510958]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_510286.3 PREDICTED: intron-binding protein aquarius P. troglodytes 100.0 1484
NP_055506.1 AQR gene product H. sapiens 100.0 1484
XP_003900787.1 PREDICTED: LOW QUALITY PROTEIN: intron-binding protein aquarius P. anubis 99.8 1546
XP_001089350.2 PREDICTED: intron-binding protein aquarius M. mulatta 99.6 1508
NP_033832.2 Aqr gene product M. musculus 98.7 1480
NP_956758.2 aqr gene product D. rerio 86.7 1483
NP_996198.2 CG31368, isoform D D. melanogaster 74.7 1459
NP_507684.4 abnormal EMBroygenesis family member (emb-4) C. elegans 64.6 1455
XP_963127.1 hypothetical protein NCU07866 N. crassa 60.9 777
NP_850297.1 intron-binding protein aquarius A. thaliana 59.8 1427
XP_001691434.1 hypothetical protein CHLREDRAFT_115185 C. reinhardtii 59.0 1377
Other hits (2 of 52) [Show all]SpeciesId(%)Len(aa)
XP_003480460.1 PREDICTED: intron-binding protein aquarius S. scrofa 99.3 1083
XP_002718043.1 PREDICTED: aquarius O. cuniculus 99.3 1491

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: testis; brain; skin; embryonic tissue; intestine; liver; placenta; pancreas; uncharacterized tissue; trachea; lung; mixed; uterus; vascular; muscle; connective tissue; kidney; mammary gland; lymph node; pituitary gland; prostate; cervix; mouth; heart; thymus; ear; bladder; blood; bone marrow; eye; parathyroid; lymph; stomach; bone; ovary; adipose tissue; thyroid
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 15
Map position: 15q14
UniSTS entry: Chr 15 WI-14003 [Map Viewer]
UniSTS entry: Chr 15 MARC_21173-21174:1027090229:1
UniSTS entry: Chr 15 AQR_8983
UniSTS entry: Chr 15 WI-16389 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (12)

NM_014691.2 Homo sapiens aquarius homolog (mouse) (AQR), mRNA PA
AK001173.1 Homo sapiens cDNA FLJ10311 fis, clone NT2RM2000359, highly similar to Homo sapiens mRNA for KIAA0560 protein P
BC070379.1 Homo sapiens aquarius homolog (mouse), mRNA (cDNA clone IMAGE:6496821), partial cds PA
BC108262.1 Homo sapiens aquarius homolog (mouse), mRNA (cDNA clone IMAGE:4403320), partial cds PA
BC127112.1 Homo sapiens aquarius homolog (mouse), mRNA (cDNA clone MGC:150701 IMAGE:40124831), complete cds P
BC127111.1 Homo sapiens aquarius homolog (mouse), mRNA (cDNA clone MGC:150700 IMAGE:40124830), complete cds P
EF553519.1 Homo sapiens clone DKFZp686B23123 AQR (AQR) mRNA, complete cds PA
AK291615.1 Homo sapiens cDNA FLJ75449 complete cds, highly similar to Homo sapiens aquarius homolog (mouse) (AQR), mRNA P
AK315815.1 Homo sapiens cDNA, FLJ79464 partial cds, highly similar to Homo sapiens aquarius P
BC027452.1 Homo sapiens aquarius homolog (mouse), mRNA (cDNA clone IMAGE:4480024), with apparent retained intron PA
BC036913.2 Homo sapiens aquarius homolog (mouse), mRNA (cDNA clone IMAGE:5109629), partial cds PA
AB011132.3 Homo sapiens mRNA for KIAA0560 protein, partial cds P

EST sequences (10 of 303) [Show all sequences]

AI073497.1 Clone IMAGE:1640271 testis 3' read P
AI092231.1 Clone IMAGE:1691159 heart 3' read A
AI092837.1 Clone IMAGE:1692404 heart 3' read
AI131306.1 Clone IMAGE:1709873 heart 3' read
AI138832.1 Clone IMAGE:1737980 testis 3' read PA
AI141109.1 Clone IMAGE:1739406 lung 3' read
BX099254.1 Clone IMAGp998N08231_;_IMAGE:150343 placenta PA
AI206622.1 Clone IMAGE:1942811 uncharacterized tissue 3' read
AI218359.1 Clone IMAGE:1845374 mixed 3' read P
CB116098.1 Clone L10ChoCK0-7-E04 liver 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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