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UGID:720486     UniGene Hs.505327     Homo sapiens (human)   SPRR2D
Small proline-rich protein 2D (SPRR2D)

Human protein-coding gene SPRR2D. Represented by 73 ESTs from 20 cDNA libraries. EST representation biased toward adult. Corresponds to reference sequence NM_006945.4. [UniGene 720486 - Hs.505327]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001110045.2 PREDICTED: hypothetical protein LOC717948 M. mulatta 94.4 71
XP_001136907.2 PREDICTED: small proline-rich protein 2A-like isoform 1 P. troglodytes 94.4 71
NP_005979.1 SPRR2A gene product H. sapiens 94.4 71
Other hits (SpeciesId(%)Len(aa)
XP_003892700.1 PREDICTED: uncharacterized protein LOC100997976 P. anubis 91.2 113

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: adult [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: connective tissue; pharynx; thyroid; brain; intestine; mouth; mixed; esophagus; lung; larynx
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1q21-q22
UniSTS entry: Chr 1 D1S2418
UniSTS entry: Chr 1 RH17673 [Map Viewer]
UniSTS entry: Chr 1 RH71351 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

M21302.1 Human small proline rich protein (sprII) mRNA, clone 174N
NM_006945.4 Homo sapiens small proline-rich protein 2D (SPRR2D), mRNA
BC093803.1 Homo sapiens cDNA clone IMAGE:7939648
BC093801.1 Homo sapiens cDNA clone IMAGE:7939646
BC120938.1 Homo sapiens small proline-rich protein 2D, mRNA (cDNA clone MGC:149415 IMAGE:40115065), complete cds
AK291317.1 Homo sapiens cDNA FLJ76407 complete cds, highly similar to Homo sapiens small proline-rich protein 2D (SPRR2D), mRNA

EST sequences (10 of 73) [Show all sequences]

AI270089.1 Clone IMAGE:1959935 esophagus 3' read A
AI276842.1 Clone IMAGE:1877426 mixed 3' read A
AI383975.1 Clone IMAGE:2088702 mixed 3' read
AI432162.1 Clone IMAGE:2114789 mixed 3' read A
AI860616.1 Clone IMAGE:2422960 lung 3' read A
AW079582.1 Clone IMAGE:2584712 intestine 3' read A
AW238280.1 Clone IMAGE:2740881 mouth 3' read
AW366762.1 mouth
AW470486.1 Clone IMAGE:2799633 intestine 3' read A
AW572396.1 Clone IMAGE:2799633 intestine 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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