NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
Finding cDNAs

UGID:131605     UniGene Hs.5019     Homo sapiens (human)   CHMP7
Charged multivesicular body protein 7 (CHMP7)

Human protein-coding gene CHMP7. Represented by 465 ESTs from 205 cDNA libraries. Corresponds to reference sequence NM_152272.3. [UniGene 131605 - Hs.5019]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001158823.1 PREDICTED: charged multivesicular body protein 7 isoform 4 P. troglodytes 100.0 452
NP_689485.1 CHMP7 gene product H. sapiens 100.0 452
XP_003902587.1 PREDICTED: charged multivesicular body protein 7 P. anubis 99.8 452
NP_598839.2 charged multivesicular body protein 7 M. musculus 98.5 450
NP_957075.1 chmp7 gene product D. rerio 58.9 450
NP_001079846.1 charged multivesicular body protein 7 X. laevis 53.4 382
Other hits (2 of 15) [Show all]SpeciesId(%)Len(aa)
XP_002808521.1 PREDICTED: LOW QUALITY PROTEIN: charged multivesicular body protein 7-like M. mulatta 99.1 458
NP_001092589.1 CHMP7 gene product B. taurus 98.9 449

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; uncharacterized tissue; testis; mixed; lung; lymph; embryonic tissue; kidney; muscle; eye; placenta; prostate; pancreas; cervix; mammary gland; skin; lymph node; mouth; thymus; connective tissue; thyroid; blood; liver; uterus; intestine; spleen; bladder; ascites; adrenal gland; vascular; heart; salivary gland; bone; pituitary gland; tonsil; ovary; parathyroid
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 8
Map position: 8p21.3
UniSTS entry: Chr 8 STS-W49732
UniSTS entry: Chr 8 MARC_14383-14384:1007138470:1
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (11)

BC042050.1 Homo sapiens CHMP family, member 7, mRNA (cDNA clone MGC:50403 IMAGE:5551762), complete cds PA
AK021776.1 Homo sapiens cDNA FLJ11714 fis, clone HEMBA1005219, highly similar to Protein CHMP7 P
BC004344.1 Homo sapiens CHMP family, member 7, mRNA (cDNA clone IMAGE:3633354), partial cds PA
BC019110.1 Homo sapiens CHMP family, member 7, mRNA (cDNA clone MGC:29816 IMAGE:5093453), complete cds PA
AK315664.1 Homo sapiens cDNA, FLJ96756 P
AK097202.1 Homo sapiens cDNA FLJ39883 fis, clone SPLEN2016268, highly similar to Protein CHMP7 P
AK092500.1 Homo sapiens cDNA FLJ35181 fis, clone PLACE6015051, highly similar to Protein CHMP7 P
AL833843.1 Homo sapiens mRNA; cDNA DKFZp434C191 (from clone DKFZp434C191) PA
AL832313.1 Homo sapiens mRNA; cDNA DKFZp667O2019 (from clone DKFZp667O2019) PA
AK296592.1 Homo sapiens cDNA FLJ57739 complete cds, highly similar to Protein CHMP7 P
NM_152272.3 Homo sapiens charged multivesicular body protein 7 (CHMP7), mRNA PA

EST sequences (10 of 465) [Show all sequences]

R17619.1 Clone IMAGE:32352 brain 5' read
R17997.1 Clone IMAGE:32497 brain 5' read
AI018738.1 Clone IMAGE:1638659 testis 3' read A
AI049639.1 Clone IMAGE:1700302 kidney 3' read A
AI089935.1 Clone IMAGE:1687324 brain 3' read A
AI090643.1 Clone IMAGE:1691609 heart 3' read A
AI095157.1 Clone IMAGE:1666272 skin 3' read A
AI096924.1 Clone IMAGE:1698463 uterus 3' read A
AI096967.1 Clone IMAGE:1702754 brain 3' read A
AA907879.1 Clone IMAGE:1520050 uncharacterized tissue 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help