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UGID:716937     UniGene Hs.501778     Homo sapiens (human)   TRIM22
Tripartite motif containing 22 (TRIM22)

Human protein-coding gene TRIM22. Represented by 198 ESTs from 130 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 716937 - Hs.501778]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_006065.2 TRIM22 gene product H. sapiens 100.0 497
NP_001230845.1 tripartite motif-containing 34B M. musculus 59.0 477
Other hits (2 of 10) [Show all]SpeciesId(%)Len(aa)
NP_001106867.1 TRIM22 gene product P. troglodytes 99.4 497
NP_001162333.1 E3 ubiquitin-protein ligase TRIM22 P. anubis 94.2 497

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; lung; uncharacterized tissue; uterus; lymph node; blood; mouth; pharynx; muscle; thymus; pancreas; spleen; connective tissue; mammary gland; bone marrow; heart; testis; mixed; eye; kidney; embryonic tissue; intestine; placenta; bladder; larynx; prostate; nerve; liver; ganglia; umbilical cord; thyroid; bone; spinal cord; pituitary gland; tonsil; ovary
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 11
Map position: 11p15
UniSTS entry: Chr 11 RH47745
UniSTS entry: Chr 11 REN99311
UniSTS entry: Chr 11 ECD24318
UniSTS entry: Chr 11 REN99252
UniSTS entry: Chr 11 REN99305
UniSTS entry: Chr 11 REN99307
UniSTS entry: Chr 11 STS-X82200
UniSTS entry: Chr 11 REN99306
UniSTS entry: Chr 11 REN99310
UniSTS entry: Chr 11 REN99308
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (15)

NM_006074.4 Homo sapiens tripartite motif containing 22 (TRIM22), transcript variant 1, mRNA PA
AL360190.1 Homo sapiens mRNA full length insert cDNA clone EUROIMAGE 746039 PA
AM040752.1 Homo sapiens partial mRNA for tripartite binding motif 22 (TRIM22 gene), TRIM22-442C allele PA
AK290434.1 Homo sapiens cDNA FLJ76655 complete cds, highly similar to Homo sapiens tripartite motif-containing 22, mRNA P
AK308796.1 Homo sapiens cDNA, FLJ98837 P
AK310098.1 Homo sapiens cDNA, FLJ17140 P
AK301192.1 Homo sapiens cDNA FLJ51115 complete cds, moderately similar to Tripartite motif-containing protein 22 P
AK298934.1 Homo sapiens cDNA FLJ51049 complete cds, highly similar to Tripartite motif-containing protein 22 P
AK298715.1 Homo sapiens cDNA FLJ51040 complete cds, highly similar to Tripartite motif-containing protein 22 P
BC022281.1 Homo sapiens tripartite motif-containing 22, mRNA (cDNA clone MGC:22417 IMAGE:4718024), complete cds PA
AL360134.1 Homo sapiens mRNA full length insert cDNA clone EUROIMAGE 1172434 PA
BC035582.1 Homo sapiens tripartite motif-containing 22, mRNA (cDNA clone MGC:44863 IMAGE:5583800), complete cds PA
NM_001199573.1 Homo sapiens tripartite motif containing 22 (TRIM22), transcript variant 2, mRNA PA
HQ842635.1 Homo sapiens clone 34 tripartite motif-containing 22 (TRIM22) mRNA, complete cds P
X82200.1 H.sapiens Staf50 mRNA PA

EST sequences (10 of 198) [Show all sequences]

AI074286.1 Clone IMAGE:1594479 intestine 3' read A
AI082207.1 Clone IMAGE:1662193 mixed 3' read A
CB053891.1 Clone IMAGE:3291164 brain 5' read
BX093905.1 Clone IMAGp998C225499_;_IMAGE:2223309 pancreas A
AI249906.1 Clone IMAGE:2000321 lymph node 3' read PA
AI275444.1 Clone IMAGE:1877528 mixed 3' read
AI276347.1 Clone IMAGE:1990546 uterus 3' read A
AI309847.1 Clone IMAGE:1914475 kidney 3' read A
R38471.1 Clone IMAGE:136965 placenta 5' read
AI356456.1 Clone IMAGE:2028076 uncharacterized tissue 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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