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UGID:716455     UniGene Hs.501296     Homo sapiens (human)   ARID3A
AT rich interactive domain 3A (BRIGHT-like) (ARID3A)

Human protein-coding gene ARID3A. Represented by 86 ESTs from 48 cDNA libraries. Corresponds to reference sequence NM_005224.2. [UniGene 716455 - Hs.501296]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_005215.1 ARID3A gene product H. sapiens 100.0 592
NP_031906.1 Arid3a gene product M. musculus 88.2 600
NP_001085467.1 AT-rich interactive domain-containing protein 3A X. laevis 77.9 538
XP_691265.5 PREDICTED: AT-rich interactive domain-containing protein 3A-like D. rerio 73.1 523
NP_788434.1 retained, isoform B D. melanogaster 71.7 251
NP_492644.2 Protein CFI-1 C. elegans 67.5 212
Other hits (2 of 34) [Show all]SpeciesId(%)Len(aa)
XP_524501.2 PREDICTED: AT-rich interactive domain-containing protein 3A P. troglodytes 99.2 362
XP_003914610.1 PREDICTED: AT-rich interactive domain-containing protein 3A P. anubis 98.5 588

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: placenta; embryonic tissue; uncharacterized tissue; lymph node; intestine; uterus; connective tissue; kidney; pancreas; mammary gland; liver; testis; eye; mixed; prostate; skin; muscle; thyroid; ovary; bone
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 19
Map position: 19p13.3
UniSTS entry: Chr 19 REU1926
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (7)

NM_005224.2 Homo sapiens AT rich interactive domain 3A (BRIGHT-like) (ARID3A), mRNA PA
BC060828.1 Homo sapiens AT rich interactive domain 3A (BRIGHT-like), mRNA (cDNA clone MGC:71697 IMAGE:30342057), complete cds PA
AY845638.1 Homo sapiens DRIL3 mRNA, complete cds PA
BC033163.1 Homo sapiens AT rich interactive domain 3A (BRIGHT-like), mRNA (cDNA clone IMAGE:4543089), partial cds PA
BC007077.1 Homo sapiens AT rich interactive domain 3A (BRIGHT-like), mRNA (cDNA clone IMAGE:4246981) A
U88047.1 Homo sapiens DNA binding protein homolog (DRIL1) mRNA, complete cds P
AY152547.1 Homo sapiens E2F binding protein (E2FBP1) mRNA, complete cds P

EST sequences (10 of 86) [Show all sequences]

AI128378.1 Clone IMAGE:1714064 placenta 3' read
R36384.1 Clone IMAGE:137147 placenta 5' read
AI343403.1 Clone IMAGE:2062125 intestine 3' read
AI394608.1 Clone IMAGE:2108702 uncharacterized tissue 3' read PA
AI635170.1 Clone IMAGE:2287445 uterus 3' read
AI680110.1 Clone IMAGE:2252027 prostate 3' read
BX282372.1 Clone IMAGp998A2211023_;_IMAGE:4996893 placenta
CB990001.1 Clone IMAGE:30347633 placenta 5' read
CB959801.1 Clone IMAGE:30345926 placenta 5' read
CB960437.1 Clone IMAGE:30347557 placenta 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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