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UGID:715880     UniGene Hs.500721     Homo sapiens (human)   MMS19
MMS19 nucleotide excision repair homolog (S. cerevisiae) (MMS19)

Human protein-coding gene MMS19. Represented by 1102 ESTs from 298 cDNA libraries. Corresponds to reference sequence NM_022362.4. [UniGene 715880 - Hs.500721]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_071757.4 MMS19 gene product H. sapiens 100.0 1029
XP_001162859.2 PREDICTED: MMS19 nucleotide excision repair protein homolog isoform 10 P. troglodytes 99.8 1098
NP_082428.1 Mms19 gene product M. musculus 94.6 1030
NP_001087156.1 MMS19 nucleotide excision repair protein homolog X. laevis 74.9 1020
XP_001920456.2 PREDICTED: MMS19 nucleotide excision repair protein homolog D. rerio 64.8 1014
Other hits (2 of 25) [Show all]SpeciesId(%)Len(aa)
XP_003904118.1 PREDICTED: MMS19 nucleotide excision repair protein homolog isoform 1 P. anubis 99.2 1029
XP_002808554.1 PREDICTED: LOW QUALITY PROTEIN: MMS19 nucleotide excision repair protein homolog M. mulatta 98.8 1013

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; intestine; lung; placenta; thymus; ovary; trachea; uncharacterized tissue; pharynx; uterus; mixed; embryonic tissue; kidney; blood; heart; lymph; umbilical cord; mouth; connective tissue; thyroid; skin; pancreas; liver; muscle; eye; mammary gland; adrenal gland; stomach; bone marrow; cervix; prostate; larynx; pineal gland; salivary gland; parathyroid; ascites; lymph node; adipose tissue; spleen; vascular; ganglia; bone
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 10
Map position: 10q24-q25
UniSTS entry: Chr 10 A002G19 [Map Viewer]
UniSTS entry: Chr 10 Cda19h12
UniSTS entry: Chr 10 MARC_27504-27505:1034367166:1
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (19)

BC080532.1 Homo sapiens MMS19 nucleotide excision repair homolog (S. cerevisiae), mRNA (cDNA clone MGC:99604 IMAGE:4889876), complete cds PA
AK025496.1 Homo sapiens cDNA: FLJ21843 fis, clone HEP01856, highly similar to AF007151 Homo sapiens clone 23967 unknown mRNA PA
AJ306408.1 Homo sapiens mRNA for MMS19 protein P
BC002692.1 Homo sapiens MMS19 nucleotide excision repair homolog (S. cerevisiae), mRNA (cDNA clone IMAGE:3605877), partial cds PA
BC117129.1 Homo sapiens MMS19 nucleotide excision repair homolog (S. cerevisiae), mRNA (cDNA clone MGC:150738 IMAGE:40125680), complete cds P
AK225312.1 Homo sapiens mRNA for MMS19-like protein variant, clone: HEP05008 PA
NM_022362.4 Homo sapiens MMS19 nucleotide excision repair homolog (S. cerevisiae) (MMS19), mRNA PA
AK027710.1 Homo sapiens cDNA FLJ14804 fis, clone NT2RP4001638, weakly similar to DNA REPAIR/TRANSCRIPTION PROTEIN MET18/MMS19 P
AF319947.1 Homo sapiens MMS19 (MMS19) mRNA, complete cds PA
BC009396.2 Homo sapiens MMS19 nucleotide excision repair homolog (S. cerevisiae), mRNA (cDNA clone IMAGE:4135275), partial cds PA
AF357881.1 Homo sapiens transcriptional coactivator MMS19 (MMS19) mRNA, complete cds PA
AK056244.1 Homo sapiens cDNA FLJ31682 fis, clone NT2RI2005335, highly similar to MMS19-like protein P
BC006575.2 Homo sapiens MMS19 nucleotide excision repair homolog (S. cerevisiae), mRNA (cDNA clone IMAGE:3543044), partial cds PA
AK314374.1 Homo sapiens cDNA, FLJ95146 P
AK298995.1 Homo sapiens cDNA FLJ55586 complete cds, highly similar to MMS19-like protein P
AK304287.1 Homo sapiens cDNA FLJ54519 complete cds, highly similar to MMS19-like protein P
BC033101.1 Homo sapiens cDNA clone IMAGE:3508402, containing frame-shift errors PA
BC143285.1 Homo sapiens cDNA clone IMAGE:9051788, containing frame-shift errors P
AF007151.1 Homo sapiens clone 23967 unknown mRNA, partial cds PA

EST sequences (10 of 1102) [Show all sequences]

AA969080.1 Clone IMAGE:1580744 mixed 3' read A
AA922489.1 Clone IMAGE:1551556 uncharacterized tissue 3' read A
AI088076.1 Clone IMAGE:1683028 parathyroid 3' read A
AI092657.1 Clone IMAGE:1693051 heart 3' read A
BX116741.1 Clone IMAGp998G08119_;_IMAGE:123679 mixed P
AI190906.1 Clone IMAGE:1733987 testis 3' read A
AI191073.1 Clone IMAGE:1740019 lung 3' read A
AI204927.1 Clone IMAGE:1684410 brain 3' read P
AI261504.1 Clone IMAGE:1871216 intestine 3' read A
CB155233.1 Clone B2N807043-13-H12 brain 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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