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UGID:137739     UniGene Hs.48849     Homo sapiens (human)   TFCP2
Transcription factor CP2 (TFCP2)

Human protein-coding gene TFCP2. Represented by 350 ESTs from 198 cDNA libraries. Corresponds to 3 reference sequences (different isoforms). [UniGene 137739 - Hs.48849]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001087537.1 PREDICTED: alpha-globin transcription factor CP2 isoform 1 M. mulatta 100.0 501
XP_003906426.1 PREDICTED: alpha-globin transcription factor CP2 isoform 1 P. anubis 100.0 501
XP_001149970.1 PREDICTED: alpha-globin transcription factor CP2 isoform 6 P. troglodytes 100.0 501
NP_005644.2 TFCP2 gene product H. sapiens 100.0 501
XP_003433577.1 PREDICTED: alpha-globin transcription factor CP2 isoform 1 C. lupus familiaris 100.0 501
XP_001504347.1 PREDICTED: alpha-globin transcription factor CP2 isoform 1 E. caballus 100.0 501
NP_001076866.1 TFCP2 gene product B. taurus 99.8 499
XP_004006395.1 PREDICTED: alpha-globin transcription factor CP2 isoform 1 O. aries 99.8 499
NP_258437.1 alpha-globin transcription factor CP2 M. musculus 98.6 501
NP_001089447.1 transcription factor CP2 X. laevis 94.5 505
XP_001336482.1 PREDICTED: si:ch211-210c8.8 D. rerio 92.5 495
NP_724895.1 gemini, isoform A D. melanogaster 50.8 248
Other hits (2 of 24) [Show all]SpeciesId(%)Len(aa)
NP_001128186.1 Tfcp2 gene product R. norvegicus 98.4 496
NP_989715.1 TFCP2 gene product G. gallus 97.4 495

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; uncharacterized tissue; testis; liver; ovary; mammary gland; bone marrow; spinal cord; pituitary gland; embryonic tissue; intestine; heart; uterus; mixed; pharynx; thyroid; amniotic fluid; eye; connective tissue; blood; lung; mouth; kidney; skin; placenta; thymus; esophagus; trachea; spleen; epididymis; adrenal gland; bladder; lymph; ascites; stomach; bone; prostate; lymph node; muscle; cervix; adipose tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 12
Map position: 12q13
UniSTS entry: Chr 12 SHGC-17299 [Map Viewer]
UniSTS entry: Chr 12 RH71191 [Map Viewer]
UniSTS entry: GDB:450224
UniSTS entry: Chr 12 GDB:373799
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

NM_005653.4 Homo sapiens transcription factor CP2 (TFCP2), transcript variant 1, mRNA P
BC003634.2 Homo sapiens transcription factor CP2, mRNA (cDNA clone MGC:3901 IMAGE:3529119), complete cds PA
AK291264.1 Homo sapiens cDNA FLJ77484 complete cds, highly similar to Homo sapiens transcription factor CP2 (TFCP2), mRNA P
AK308087.1 Homo sapiens cDNA, FLJ98035 P
M84810.1 Human alpha-globin transcription factor CP2 mRNA sequence P
NM_001173453.1 Homo sapiens transcription factor CP2 (TFCP2), transcript variant 3, mRNA P
NM_001173452.1 Homo sapiens transcription factor CP2 (TFCP2), transcript variant 2, mRNA P
U03494.1 Human transcription factor LSF mRNA, complete cds P
U03495.1 Human transcription factor LSF-ID mRNA, complete cds P

EST sequences (10 of 350) [Show all sequences]

AI017025.1 Clone IMAGE:1635277 kidney 3' read A
AI074067.1 Clone IMAGE:1681931 skin 3' read
R20718.1 Clone IMAGE:36051 brain 5' read
AI077537.1 Clone IMAGE:1659809 embryonic tissue 3' read A
AI142906.1 Clone IMAGE:1678271 mixed 3' read A
AI148250.1 Clone IMAGE:1681743 skin 3' read A
R24568.1 Clone IMAGE:34618 brain 5' read
CB137377.1 Clone L6ChoCK0-24-H10 liver 5' read
CB164217.1 Clone S23N672133-1-H04 stomach 5' read
AI273314.1 Clone IMAGE:1876713 mixed 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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