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UGID:700240     UniGene Hs.485081     Homo sapiens (human)   RPL17
Ribosomal protein L17 (RPL17)

Human protein-coding gene RPL17. Represented by 716 ESTs from 237 cDNA libraries. [UniGene 700240 - Hs.485081]

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001002239.2 60S ribosomal protein L17 M. musculus 100.0 183
NP_958818.1 Rpl17 gene product R. norvegicus 100.0 183
XP_001365329.1 PREDICTED: 60S ribosomal protein L17-like M. domestica 100.0 183
NP_001070168.1 RPL17 gene product T. guttata 100.0 183
XP_001231654.1 PREDICTED: 60S ribosomal protein L17-like G. gallus 100.0 183
XP_003429123.1 PREDICTED: 60S ribosomal protein L17-like isoform 2 O. anatinus 100.0 183
XP_001096059.1 PREDICTED: 60S ribosomal protein L17-like M. mulatta 100.0 183
XP_003914417.1 PREDICTED: 60S ribosomal protein L17-like P. anubis 100.0 183
XP_001164527.1 PREDICTED: 60S ribosomal protein L17-like isoform 2 P. troglodytes 100.0 183
NP_001186269.1 RPL17 gene product H. sapiens 100.0 183
XP_537346.1 PREDICTED: 60S ribosomal protein L17 isoform 1 C. lupus familiaris 100.0 183
XP_003365594.1 PREDICTED: 60S ribosomal protein L17 isoform 1 E. caballus 100.0 183
NP_001231487.1 RPL17 gene product S. scrofa 100.0 183
NP_001029631.1 RPL17 gene product B. taurus 100.0 183
XP_004003220.1 PREDICTED: 60S ribosomal protein L17-like O. aries 100.0 183
XP_002709431.1 PREDICTED: ribosomal protein L17-like O. cuniculus 100.0 183
NP_001159771.1 ribosomal protein L17 X. laevis 98.4 183
NP_001229966.1 60S ribosomal protein L17 D. rerio 96.7 183
NP_572346.1 ribosomal protein L17, isoform D D. melanogaster 76.2 185
NP_740781.1 Protein RPL-17, isoform a C. elegans 73.3 186
NP_174060.1 60S ribosomal protein L17-1 A. thaliana 69.3 175
XP_961479.2 60S ribosomal protein L17 N. crassa 67.6 182
XP_001693454.1 ribosomal protein L17, component of cytosolic 80S ribosome and 60S large subunit C. reinhardtii 65.0 185
NP_012358.1 Rpl17bp S. cerevisiae 59.8 183
Other hits (2 of 50) [Show all]SpeciesId(%)Len(aa)
XP_003213392.1 PREDICTED: 60S ribosomal protein L17-like, partial M. gallopavo 98.8 168
XP_003453655.1 PREDICTED: 60S ribosomal protein L17-like O. niloticus 97.8 183

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: embryonic tissue; eye; lymph; lung; skin; uterus; liver; uncharacterized tissue; brain; tonsil; intestine; prostate; mammary gland; placenta; heart; muscle; kidney; pituitary gland; connective tissue; bone marrow; mixed; ovary; testis; ascites; stomach; blood; salivary gland; pancreas; umbilical cord; cervix; bladder; lymph node; vascular; bone; thyroid; thymus; spleen; adrenal gland; pharynx; larynx
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 18q21
UniSTS entry: Chr 1 D17S1714
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (1)

BC106031.1 Homo sapiens ribosomal protein L17, mRNA (cDNA clone MGC:117162 IMAGE:4540700), complete cds PA

EST sequences (10 of 716) [Show all sequences]

AA961432.1 Clone IMAGE:1599558 uncharacterized tissue 3' read PA
AA975624.1 Clone IMAGE:1590987 kidney 3' read PA
AA977458.1 Clone IMAGE:1591157 kidney 3' read PA
AA978017.1 Clone IMAGE:1590807 kidney 3' read P
AA989302.1 Clone IMAGE:1602424 lung 3' read P
AI000308.1 Clone IMAGE:1613972 uncharacterized tissue 3' read PA
AI081002.1 Clone IMAGE:1652945 mixed 3' read P
AI186285.1 Clone IMAGE:1724261 placenta 3' read PA
CB156011.1 Clone L17N670205n1-2-D12 liver 5' read P
CB156991.1 Clone L17N670205n1-6-G02 liver 5' read P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

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