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UGID:137629     UniGene Hs.48297     Homo sapiens (human)   RCHY1
Ring finger and CHY zinc finger domain containing 1, E3 ubiquitin protein ligase (RCHY1)

Human protein-coding gene RCHY1. Represented by 259 ESTs from 145 cDNA libraries. Corresponds to 5 reference sequences (different isoforms). [UniGene 137629 - Hs.48297]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_003898798.1 PREDICTED: RING finger and CHY zinc finger domain-containing protein 1 isoform 1 P. anubis 100.0 262
XP_001100966.1 PREDICTED: RING finger and CHY zinc finger domain-containing protein 1 isoform 2 M. mulatta 100.0 260
XP_517222.1 PREDICTED: uncharacterized protein LOC461248 isoform 4 P. troglodytes 100.0 260
NP_056251.2 RCHY1 gene product H. sapiens 100.0 260
NP_080833.1 Rchy1 gene product M. musculus 94.2 260
NP_001088749.1 ring finger and CHY zinc finger domain containing 1, E3 ubiquitin protein ligase X. laevis 84.1 245
NP_997765.1 rchy1 gene product D. rerio 73.8 248
NP_609030.1 CG16947, isoform A D. melanogaster 52.4 252
NP_191856.4 ring finger and CHY zinc finger domain-containing protein 1 A. thaliana 48.7 271
XP_001703786.1 predicted protein C. reinhardtii 45.9 159
Other hits (2 of 46) [Show all]SpeciesId(%)Len(aa)
XP_001490756.2 PREDICTED: RING finger and CHY zinc finger domain-containing protein 1-like E. caballus 99.1 230
XP_002717057.1 PREDICTED: androgen receptor N-terminal-interacting protein-like O. cuniculus 98.8 260

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; lung; embryonic tissue; kidney; uncharacterized tissue; heart; blood; ovary; mammary gland; uterus; mixed; liver; muscle; stomach; spleen; trachea; bone; bladder; connective tissue; placenta; skin; prostate; intestine; vascular; eye; lymph node; cervix; bone marrow; pineal gland; thyroid; salivary gland; nerve; parathyroid
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 4
Map position: 4q21.1
UniSTS entry: Chr 4 RH91327
UniSTS entry: Chr 1 D15S1390
UniSTS entry: Chr 10 D10S1322E [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (23)

BC047393.1 Homo sapiens ring finger and CHY zinc finger domain containing 1, mRNA (cDNA clone MGC:48337 IMAGE:5301408), complete cds PA
AL050144.1 Homo sapiens mRNA; cDNA DKFZp586C1620 (from clone DKFZp586C1620); partial cds PA
NM_001009922.2 Homo sapiens ring finger and CHY zinc finger domain containing 1, E3 ubiquitin protein ligase (RCHY1), transcript variant 3, mRNA P
NM_001008925.2 Homo sapiens ring finger and CHY zinc finger domain containing 1, E3 ubiquitin protein ligase (RCHY1), transcript variant 2, mRNA P
AB209072.1 Homo sapiens mRNA for RING finger and CHY zinc finger domain containing protein 1 variant protein P
AY888047.1 Homo sapiens ring finger and CHY zinc finger domain containing 1 variant 2 (RCHY1) mRNA, complete cds, alternatively spliced PA
AF255666.1 Homo sapiens CHIMP mRNA, complete cds PA
BC015464.1 Homo sapiens ring finger and CHY zinc finger domain containing 1, mRNA (cDNA clone IMAGE:3916707), partial cds PA
AF305424.1 Homo sapiens zinc-finger protein mRNA, complete cds P
AK308848.1 Homo sapiens cDNA, FLJ98889 P
AK308754.1 Homo sapiens cDNA, FLJ98795 P
AK309555.1 Homo sapiens cDNA, FLJ99596 P
AF247041.1 Homo sapiens androgen receptor N-terminal-interacting protein (ARNIP) mRNA, complete cds P
AK091501.1 Homo sapiens cDNA FLJ34182 fis, clone FCBBF3016928, highly similar to RING finger and CHY zinc finger domain-containing protein 1 P
GQ250946.1 Homo sapiens p53-induced protein with RING-H2 variant C (RCHY1) mRNA, complete cds, alternatively spliced P
GQ250945.1 Homo sapiens p53-induced protein with RING-H2 variant B (RCHY1) mRNA, complete cds, alternatively spliced P
GQ250944.1 Homo sapiens p53-induced protein with RING-H2 variant A (RCHY1) mRNA, complete cds, alternatively spliced P
GU937000.1 Homo sapiens p53-induced protein with RING-H2 variant D (RCHY1) mRNA, complete cds P
JF691539.1 Homo sapiens cell-line HepG2 PIRH2F (RCHY1) mRNA, complete cds P
JF691538.1 Homo sapiens cell-line HepG2 PIRH2E (RCHY1) mRNA, complete cds P
NM_015436.3 Homo sapiens ring finger and CHY zinc finger domain containing 1, E3 ubiquitin protein ligase (RCHY1), transcript variant 1, mRNA P
NR_037914.1 Homo sapiens ring finger and CHY zinc finger domain containing 1, E3 ubiquitin protein ligase (RCHY1), transcript variant 5, non-coding RNA P
NR_037913.1 Homo sapiens ring finger and CHY zinc finger domain containing 1, E3 ubiquitin protein ligase (RCHY1), transcript variant 4, non-coding RNA P

EST sequences (10 of 259) [Show all sequences]

AA978000.1 Clone IMAGE:1590256 kidney 3' read A
AA886467.1 Clone IMAGE:1500065 lung 3' read A
AI015243.1 Clone IMAGE:1624101 embryonic tissue 3' read A
AA928591.1 Clone IMAGE:1552945 uncharacterized tissue 3' read A
AI096477.1 Clone IMAGE:1685674 brain 3' read A
AI122912.1 Clone IMAGE:1509410 mixed 3' read A
AI131015.1 Clone IMAGE:1706618 heart 3' read A
AI150448.1 Clone IMAGE:1752564 testis 3' read A
AI161096.1 Clone IMAGE:1720977 uterus 3' read A
AI161097.1 Clone IMAGE:1720981 uterus 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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