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UGID:681990     UniGene Hs.466831     Homo sapiens (human)   PAFAH1B3
Platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa) (PAFAH1B3)

Human protein-coding gene PAFAH1B3. Represented by 274 ESTs from 139 cDNA libraries. Corresponds to 3 reference sequences (different isoforms). [UniGene 681990 - Hs.466831]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001154254.1 PREDICTED: platelet-activating factor acetylhydrolase IB subunit gamma isoform 6 P. troglodytes 100.0 230
NP_001139411.1 PAFAH1B3 gene product H. sapiens 100.0 230
XP_003915671.1 PREDICTED: platelet-activating factor acetylhydrolase IB subunit gamma P. anubis 99.6 230
NP_032802.1 Pafah1b3 gene product M. musculus 97.8 231
NP_001088693.1 platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa) X. laevis 74.4 222
NP_957352.1 pafah1b3 gene product D. rerio 73.1 219
NP_727895.1 Platelet-activating factor acetylhydrolase alpha, isoform A D. melanogaster 49.8 215
Other hits (2 of 29) [Show all]SpeciesId(%)Len(aa)
XP_001501229.1 PREDICTED: platelet-activating factor acetylhydrolase IB subunit gamma-like E. caballus 99.1 230
XP_002722351.1 PREDICTED: platelet-activating factor acetylhydrolase, isoform Ib, gamma subunit O. cuniculus 99.1 230

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; lung; mixed; eye; intestine; uterus; embryonic tissue; uncharacterized tissue; cervix; blood; ovary; pancreas; stomach; heart; kidney; skin; thyroid; tonsil; testis; placenta; vascular; lymph; bone marrow; bladder; ascites; liver; prostate; connective tissue; salivary gland; mammary gland; lymph node; pituitary gland; parathyroid; spleen
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 19
Map position: 19q13.1
UniSTS entry: Chr 19 RH71329 [Map Viewer]
UniSTS entry: Chr 19 STS-AA011180
UniSTS entry: Chr 19 NIB1825 [Map Viewer]
UniSTS entry: Chr 19 D19S674E
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (7)

NM_002573.3 Homo sapiens platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa) (PAFAH1B3), transcript variant 2, mRNA PA
CR407626.1 Homo sapiens full open reading frame cDNA clone RZPDo834D022D for gene PAFAH1B3, platelet-activating factor acetylhydrolase, isoform Ib, gamma subunit 29kDa complete cds, without stopcodon P
D63391.1 Homo sapiens mRNA for platelet activating factor acetylhydrolase IB gamma-subunit, complete cds P
BC003016.1 Homo sapiens platelet-activating factor acetylhydrolase, isoform Ib, gamma subunit 29kDa, mRNA (cDNA clone MGC:4046 IMAGE:2822228), complete cds PA
BC007863.2 Homo sapiens platelet-activating factor acetylhydrolase, isoform Ib, gamma subunit 29kDa, mRNA (cDNA clone MGC:14395 IMAGE:4301185), complete cds PA
NM_001145940.1 Homo sapiens platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa) (PAFAH1B3), transcript variant 3, mRNA PA
NM_001145939.1 Homo sapiens platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa) (PAFAH1B3), transcript variant 1, mRNA PA

EST sequences (10 of 274) [Show all sequences]

AA970488.1 Clone IMAGE:1579280 mixed 3' read P
AA905025.1 Clone IMAGE:1507310 mixed 3' read
AA909721.1 Clone IMAGE:1544212 mixed 3' read
AI031550.1 Clone IMAGE:1650052 parathyroid 3' read PA
AI031830.1 Clone IMAGE:1645988 parathyroid 3' read PA
AI039801.1 Clone IMAGE:1659652 embryonic tissue 3' read PA
AI056053.1 Clone IMAGE:1659372 embryonic tissue 3' read PA
AI076287.1 Clone IMAGE:1673546 mixed 3' read PA
AI081698.1 Clone IMAGE:1653222 mixed 3' read PA
AI097072.1 Clone IMAGE:1676055 embryonic tissue 3' read PA


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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