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UGID:678105     UniGene Hs.462946     Homo sapiens (human)   FBXL20
F-box and leucine-rich repeat protein 20 (FBXL20)

Human protein-coding gene FBXL20. Represented by 355 ESTs from 113 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 678105 - Hs.462946]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001030268.1 FBXL20 gene product B. taurus 100.0 437
NP_082425.1 Fbxl20 gene product M. musculus 100.0 435
XP_001172452.1 PREDICTED: F-box/LRR-repeat protein 20 isoform 3 P. troglodytes 100.0 435
NP_116264.2 FBXL20 gene product H. sapiens 100.0 435
XP_850563.2 PREDICTED: F-box/LRR-repeat protein 20 isoform 2 C. lupus familiaris 100.0 435
XP_003483043.1 PREDICTED: F-box/LRR-repeat protein 20-like isoform 2 S. scrofa 100.0 435
XP_004012887.1 PREDICTED: F-box/LRR-repeat protein 20 isoform 1 O. aries 100.0 435
XP_003912972.1 PREDICTED: F-box/LRR-repeat protein 20 isoform 1 P. anubis 100.0 421
XP_001917600.2 PREDICTED: f-box/LRR-repeat protein 20 isoform 1 E. caballus 100.0 421
XP_001085981.2 PREDICTED: f-box/LRR-repeat protein 20 M. mulatta 100.0 350
XP_002719383.1 PREDICTED: mKIAA4147 protein-like O. cuniculus 99.8 421
NP_001087065.1 F-box and leucine-rich repeat protein 20 X. laevis 95.6 435
XP_002664757.1 PREDICTED: f-box/LRR-repeat protein 20-like isoform 1 D. rerio 94.8 421
NP_001097272.1 CG9003, isoform C D. melanogaster 66.4 410
NP_741248.1 Protein C02F5.7, isoform b C. elegans 52.0 464
Other hits (2 of 28) [Show all]SpeciesId(%)Len(aa)
XP_001371176.2 PREDICTED: f-box/LRR-repeat protein 20 M. domestica 99.1 431
XP_003222488.1 PREDICTED: f-box/LRR-repeat protein 20-like A. carolinensis 99.0 421

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: mammary gland; brain; mouth; mixed; intestine; lung; larynx; uncharacterized tissue; connective tissue; cervix; blood; stomach; spleen; skin; vascular; thyroid; adrenal gland; eye; uterus; embryonic tissue; ovary; placenta; pancreas; bone; bladder; nerve; ganglia; heart; testis; liver; lymph node; lymph; kidney; muscle; adipose tissue; pineal gland; prostate
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 17
Map position: 17q12
UniSTS entry: Chr 17 RH70794 [Map Viewer]
UniSTS entry: Chr 17 RH46383 [Map Viewer]
UniSTS entry: Chr 17 STS-W38387 [Map Viewer]
UniSTS entry: Chr 17 RH102620
UniSTS entry: Chr 1 D1S1423
UniSTS entry: Chr 1 D11S3114
UniSTS entry: Chr 1 D16S325
UniSTS entry: Chr 1 RH79802
UniSTS entry: Chr 1 D11S2560
UniSTS entry: Chr 1 L18426
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (10)

AL117623.1 Homo sapiens mRNA; cDNA DKFZp564O2364 (from clone DKFZp564O2364) A
AK123048.1 Homo sapiens cDNA FLJ41053 fis, clone SPLEN2002467, highly similar to F-box/LRR-repeat protein 20 P
AK024690.1 Homo sapiens cDNA: FLJ21037 fis, clone CAE10055 A
DQ223959.1 Homo sapiens F-box and leucine-rich repeat protein 20 variant b mRNA, complete cds, alternatively spliced PA
BC007557.1 Homo sapiens F-box and leucine-rich repeat protein 20, mRNA (cDNA clone MGC:15482 IMAGE:2987858), complete cds PA
NM_032875.2 Homo sapiens F-box and leucine-rich repeat protein 20 (FBXL20), transcript variant 1, mRNA PA
AK291844.1 Homo sapiens cDNA FLJ78190 complete cds P
AK312612.1 Homo sapiens cDNA, FLJ92993, highly similar to Homo sapiens F-box and leucine-rich repeat protein 20 (FBXL20), mRNA P
NM_001184906.1 Homo sapiens F-box and leucine-rich repeat protein 20 (FBXL20), transcript variant 2, mRNA P
BC042012.1 Homo sapiens hypothetical protein LOC90110, mRNA (cDNA clone IMAGE:5311439) A

EST sequences (10 of 355) [Show all sequences]

AA972098.1 Clone IMAGE:1582810 mixed 3' read
AI091110.1 Clone IMAGE:1689779 mixed 3' read
AA910056.1 Clone IMAGE:1525945 mixed 3' read P
AI122770.1 Clone IMAGE:1690021 mixed 3' read
AI142092.1 Clone IMAGE:1651328 mixed 3' read
BX105698.1 Clone IMAGp998N142976_;_IMAGE:1185229 lymph node PA
BX116418.1 Clone IMAGp998P07286_;_IMAGE:52015 brain A
AI264799.1 Clone IMAGE:1932465 mixed 3' read
CB126795.1 Clone L5HLK1s1-25-H12 liver 5' read
AI198406.1 Clone IMAGE:1861111 brain 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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