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UGID:677239     UniGene Hs.462080     Homo sapiens (human)   SCIMP
SLP adaptor and CSK interacting membrane protein (SCIMP)

Human protein-coding gene SCIMP. Represented by 43 ESTs from 24 cDNA libraries. EST representation biased toward juvenile. Corresponds to 2 reference sequences (different isoforms). [UniGene 677239 - Hs.462080]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_996986.1 SCIMP gene product H. sapiens 100.0 144
NP_001038991.1 Scimp gene product M. musculus 68.5 130
Other hits (2 of 9) [Show all]SpeciesId(%)Len(aa)
XP_001174640.2 PREDICTED: SLP adapter and CSK-interacting membrane protein isoform 1 P. troglodytes 98.6 145
XP_001117824.2 PREDICTED: transmembrane protein C17orf87-like M. mulatta 94.9 138

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: juvenile [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: uncharacterized tissue; lymph node; intestine; brain; spleen; lung; connective tissue; uterus; thymus; testis; eye; mixed; blood; kidney
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 17
Map position: 17p13.2
UniSTS entry: Chr 17 RH18233 [Map Viewer]
UniSTS entry: Chr 17 SHGC-33773 [Map Viewer]
UniSTS entry: Chr 1 D3S1673
UniSTS entry: Chr 1 D1S1425
UniSTS entry: Chr 1 GDB:434012
UniSTS entry: Chr 1 D8S2279
UniSTS entry: Chr 1 RH80031
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (11)

AY358809.1 Homo sapiens clone DNA144844 DTFT5783 (UNQ5783) mRNA, complete cds PA
NM_207103.3 Homo sapiens SLP adaptor and CSK interacting membrane protein (SCIMP), transcript variant 1, mRNA P
BC127925.1 Homo sapiens chromosome 17 open reading frame 87, mRNA (cDNA clone MGC:158077 IMAGE:40132612), complete cds P
BC130556.1 Homo sapiens chromosome 17 open reading frame 87, mRNA (cDNA clone MGC:163428 IMAGE:40146587), complete cds P
BC130554.1 Homo sapiens chromosome 17 open reading frame 87, mRNA (cDNA clone MGC:163426 IMAGE:40146585), complete cds P
DQ778084.1 Homo sapiens clone BFC06106 hypothetical protein mRNA, complete cds P
AK057142.1 Homo sapiens cDNA FLJ32580 fis, clone SPLEN2000270 P
AK310145.1 Homo sapiens cDNA, FLJ17187 P
AK297035.1 Homo sapiens cDNA FLJ52198 complete cds P
BC144395.1 Homo sapiens chromosome 17 open reading frame 87, mRNA (cDNA clone MGC:177933 IMAGE:9052916), complete cds P
NM_001271842.1 Homo sapiens SLP adaptor and CSK interacting membrane protein (SCIMP), transcript variant 2, mRNA

EST sequences (10 of 43) [Show all sequences]

AI582365.1 Clone IMAGE:2213858 lung 3' read P
BX279842.1 Clone IMAGp998J035474_;_IMAGE:2213858 lung P
AI823787.1 Clone IMAGE:2402831 kidney 3' read A
AI825110.1 Clone IMAGE:2304637 uncharacterized tissue 3' read A
AI928106.1 Clone IMAGE:2464505 kidney 3' read A
BX411363.1 Clone CS0DG001YJ23 uncharacterized tissue 3' read
BX410087.2 Clone CS0DG001YC18 uncharacterized tissue 5' read
AW016164.1 Clone IMAGE:2712124 uncharacterized tissue 3' read A
AW401804.1 Clone IMAGE:3053782 lymph node 5' read
AW500883.1 Clone IMAGE:3073349 lymph node 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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