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UGID:623497     UniGene Hs.454534     Homo sapiens (human)   USF2
Upstream transcription factor 2, c-fos interacting (USF2)

Human protein-coding gene USF2. Represented by 372 ESTs from 189 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 623497 - Hs.454534]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_003358.1 USF2 gene product H. sapiens 100.0 345
XP_003954533.1 PREDICTED: LOW QUALITY PROTEIN: upstream stimulatory factor 2, partial P. troglodytes 99.6 236
NP_035810.1 Usf2 gene product M. musculus 99.1 345
NP_001088700.1 upstream transcription factor 2, c-fos interacting X. laevis 86.1 309
NP_001116257.1 upstream stimulatory factor 2 D. rerio 78.3 322
Other hits (2 of 24) [Show all]SpeciesId(%)Len(aa)
XP_003127089.1 PREDICTED: upstream stimulatory factor 2 isoform 1 S. scrofa 99.4 345
XP_003915391.1 PREDICTED: upstream stimulatory factor 2, partial P. anubis 99.4 342

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; uncharacterized tissue; heart; spleen; adrenal gland; mixed; mammary gland; prostate; intestine; cervix; lung; esophagus; epididymis; eye; lymph node; amniotic fluid; mouth; pancreas; ovary; skin; stomach; embryonic tissue; placenta; lymph; muscle; uterus; kidney; larynx; blood; liver; pituitary gland; ascites; bone; connective tissue; salivary gland; bladder; parathyroid; ganglia; testis; adipose tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 19
Map position: 19q13
UniSTS entry: Chr 19 STS-N20344
UniSTS entry: Chr 19 RH75657
UniSTS entry: Chr 19 STS-X90824
UniSTS entry: Chr 19 STS-S50537 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (12)

BC049821.1 Homo sapiens upstream transcription factor 2, c-fos interacting, mRNA (cDNA clone MGC:52244 IMAGE:5483523), complete cds PA
NM_003367.2 Homo sapiens upstream transcription factor 2, c-fos interacting (USF2), transcript variant 1, mRNA PA
AY147880.1 Homo sapiens upstream stimulatory factor 2c (USF2) mRNA, complete cds, alternatively spliced P
NM_207291.1 Homo sapiens upstream transcription factor 2, c-fos interacting (USF2), transcript variant 2, mRNA PA
CR536504.1 Homo sapiens full open reading frame cDNA clone RZPDo834C0720D for gene USF2, upstream transcription factor 2, c-fos interacting; complete cds, incl. stopcodon P
AY007087.1 Homo sapiens clone TCCCIA00046 mRNA sequence P
X90824.1 H.sapiens mRNA for USF2a & USF2b, clone P9DH PA
X90825.1 H.sapiens mRNA for USF2a & USF2b, clone P2 PA
X90826.1 H.sapiens mRNA for USF2 & USF2b, clone P9 P
AK297022.1 Homo sapiens cDNA FLJ60670 complete cds, highly similar to Upstream stimulatory factor 2 P
S50537.1 upstream stimulatory factor=transcription factor [human, B cells, Namalwa cell, mRNA Partial, 1299 nt] PA
M77476.1 Human helix-loop-helix zipper protein mRNA P

EST sequences (10 of 372) [Show all sequences]

AA903222.1 Clone IMAGE:1517762 uncharacterized tissue 3' read A
AA978286.1 Clone IMAGE:1579898 mixed 3' read A
AA905080.1 Clone IMAGE:1507334 mixed 3' read
AI050913.1 Clone IMAGE:1648563 parathyroid 3' read P
AI128012.1 Clone IMAGE:1712301 uterus 3' read
BX105154.1 Clone IMAGp998G23662_;_IMAGE:296494 mixed A
AI192666.1 Clone IMAGE:1743551 lung 3' read A
AI205011.1 Clone IMAGE:1684538 brain 3' read P
AI221392.1 Clone IMAGE:1842608 mixed 3' read
AI085527.1 Clone IMAGE:1750938 brain 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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