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UGID:618564     UniGene Hs.449601     Homo sapiens (human)   LOC96610
BMS1 homolog, ribosome assembly protein (yeast) pseudogene (LOC96610)

Human pseudo gene LOC96610. Represented by 190 ESTs from 120 cDNA libraries. Corresponds to reference sequence NR_027293.1. [UniGene 618564 - Hs.449601]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001144731.2 PREDICTED: ribosome biogenesis protein BMS1 homolog isoform 2 P. troglodytes 95.4 151
NP_919320.1 ribosome biogenesis protein BMS1 homolog M. musculus 86.7 392
XP_001719673.3 PREDICTED: immunoglobulin iota chain-like H. sapiens 75.7 107
NP_001104620.2 bms1l gene product D. rerio 75.0 388
NP_015107.1 Bms1p S. cerevisiae 64.1 170
NP_504245.3 Protein Y61A9LA.10 C. elegans 58.0 348
NP_648945.1 CG7728 D. melanogaster 54.4 355
NP_172157.1 BMS1 and NUC121 domain-containing protein A. thaliana 54.1 362
XP_001698464.1 hypothetical protein CHLREDRAFT_113591 C. reinhardtii 53.7 313
XP_956329.1 hypothetical protein NCU04348 N. crassa 53.4 343
Other hits (2 of 58) [Show all]SpeciesId(%)Len(aa)
XP_001091705.1 PREDICTED: immunoglobulin omega chain-like M. mulatta 90.9 175
XP_003905336.1 PREDICTED: immunoglobulin omega chain-like P. anubis 90.9 175

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; embryonic tissue; vascular; intestine; mammary gland; mixed; muscle; uterus; bladder; ovary; connective tissue; adrenal gland; testis; lung; tonsil; heart; placenta; bone marrow; thymus; skin; uncharacterized tissue; liver; blood; kidney; lymph node; prostate; pancreas; salivary gland; trachea; lymph; amniotic fluid; parathyroid; eye
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 22
Map position: 22q11.22
UniSTS entry: Chr 22 RH102878
UniSTS entry: Chr 22 RH38870
UniSTS entry: Chr 1 D11S2560
UniSTS entry: Chr 22 A009Q33
UniSTS entry: Chr 22 G32786
UniSTS entry: Chr 22 D22S1040
UniSTS entry: Chr 22 D22S1543
UniSTS entry: Chr 22 G54039
UniSTS entry: Chr 22 IGLC6
UniSTS entry: Chr 12 WI-21900 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

BX641141.1 Homo sapiens mRNA; cDNA DKFZp686N19169 (from clone DKFZp686N19169) PA
AK026408.1 Homo sapiens cDNA: FLJ22755 fis, clone KAIA0769 PA
BC133659.1 Homo sapiens hypothetical gene LOC96610, mRNA (cDNA clone IMAGE:40021721) P
AK090629.1 Homo sapiens cDNA FLJ33310 fis, clone BNGH42004679, moderately similar to Immunoglobulin lambda light chain variable region P
BC033148.1 Homo sapiens cDNA clone IMAGE:4122983, containing frame-shift errors PA
NR_027293.1 Homo sapiens BMS1 homolog, ribosome assembly protein (yeast) pseudogene (LOC96610), non-coding RNA P

EST sequences (10 of 190) [Show all sequences]

AA977980.1 Clone IMAGE:1592367 kidney 3' read A
AA994753.1 Clone IMAGE:1626687 mixed 3' read A
R19221.1 Clone IMAGE:33231 brain 5' read
AI050729.1 Clone IMAGE:1663947 skin 3' read
AI082672.1 Clone IMAGE:1660605 mixed 3' read PA
AI187030.1 Clone IMAGE:1741223 lung 3' read
AI220782.1 Clone IMAGE:1758347 placenta 3' read A
CB119889.1 Clone L8SCK0-38-H11 liver 5' read
AI278164.1 Clone IMAGE:1878402 mixed 3' read PA
AI471249.1 Clone IMAGE:2106753 brain 3' read PA


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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