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UGID:241511     UniGene Hs.446474     Homo sapiens (human)   C4orf48
Chromosome 4 open reading frame 48 (C4orf48)

Human protein-coding gene C4orf48. Represented by 33 ESTs from 22 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 241511 - Hs.446474]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001161715.1 C4orf48 gene product H. sapiens 100.0 127
NP_001028630.1 Gm1673 gene product M. musculus 80.9 110
Other hits (2 of 5) [Show all]SpeciesId(%)Len(aa)
XP_002808315.1 PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein C4orf48-like M. mulatta 99.2 126
XP_517070.3 PREDICTED: neuropeptide-like protein C4orf48 homolog P. troglodytes 97.6 126

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; eye; mixed; pancreas; prostate; placenta; uncharacterized tissue; intestine; liver
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 4
Map position: 4p16.3
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (5)

BC047038.1 Homo sapiens hypothetical gene supported by BC038466; BC062790, mRNA (cDNA clone IMAGE:5200861) PA
BC062790.1 Homo sapiens hypothetical gene supported by BC038466; BC062790, mRNA (cDNA clone IMAGE:4775221) PA
NM_001141936.2 Homo sapiens chromosome 4 open reading frame 48 (C4orf48), transcript variant 2, mRNA PA
NM_001168243.1 Homo sapiens chromosome 4 open reading frame 48 (C4orf48), transcript variant 1, mRNA PA
BC038466.1 Homo sapiens hypothetical gene supported by BC038466; BC062790, mRNA (cDNA clone IMAGE:5226643) PA

EST sequences (10 of 33) [Show all sequences]

AI198154.1 Clone IMAGE:1860008 brain 3' read A
AI341602.1 Clone IMAGE:2010008 uncharacterized tissue 3' read PA
AI499043.1 Clone IMAGE:2166437 brain 3' read PA
AI738504.1 Clone IMAGE:2391990 intestine 3' read A
AI929674.1 Clone IMAGE:2519442 brain 5' read PA
AW157771.1 Clone IMAGE:2783163 brain 3' read PA
AW160730.1 Clone IMAGE:2782081 brain 5' read P
AW163812.1 Clone IMAGE:2783163 brain 5' read P
BP432167.1 Clone LEU3257_4_H2
AW291471.1 Clone IMAGE:2724151 uncharacterized tissue 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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