NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy

Query Tips
Build Info
Library Browser
Download UniGene

Related Databases

NIH cDNA Projects
Finding cDNAs

UGID:240377     UniGene Hs.445340     Homo sapiens (human)  
Transcribed locus, strongly similar to NP_037241.1 Otx1 gene product [Rattus norvegicus]

Human putative protein-coding gene. Represented by 7 ESTs from 7 cDNA libraries. [UniGene 240377 - Hs.445340]

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001084150.1 PREDICTED: homeobox protein OTX1-like isoform 3 M. mulatta 100.0 166
XP_003908766.1 PREDICTED: homeobox protein OTX1 P. anubis 100.0 166
XP_001917473.1 PREDICTED: LOW QUALITY PROTEIN: homeobox protein OTX1-like E. caballus 100.0 161
XP_003125144.1 PREDICTED: homeobox protein OTX1-like S. scrofa 100.0 161
NP_001192946.1 orthodenticle homeobox 1 B. taurus 100.0 161
XP_004005896.1 PREDICTED: homeobox protein OTX1 isoform 1 O. aries 100.0 161
NP_055377.1 OTX1 gene product H. sapiens 99.4 166
NP_035153.1 Otx1 gene product M. musculus 97.0 166
NP_571325.2 otx1b gene product D. rerio 93.2 146
NP_001081009.1 orthodenticle homeobox 1 X. laevis 89.1 165
Other hits (2 of 17) [Show all]SpeciesId(%)Len(aa)
XP_852530.1 PREDICTED: homeobox protein OTX1 isoform 1 C. lupus familiaris 99.4 161
NP_037241.1 Otx1 gene product R. norvegicus 97.6 166

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
cDNA Sources: embryonic tissue; eye; intestine; esophagus; brain
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 2
UniSTS entry: Chr 2 Otx1
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

EST sequences (7)

CN262766.1 embryonic tissue 5' read
CN263519.1 embryonic tissue 5' read
BE258323.1 Clone IMAGE:3355563 eye 5' read P
BF063678.1 Clone IMAGE:3323989 intestine 3' read P
DB014133.1 Clone TESOP2002858 esophagus 5' read
BM713976.1 Clone UI-E-EJ0-ahq-c-14-0-UI eye 5' read P
M85320.1 Clone HEFBE18 brain

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help