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UGID:239701     UniGene Hs.444664     Homo sapiens (human)   PALB2
Partner and localizer of BRCA2 (PALB2)

Human protein-coding gene PALB2. Represented by 110 ESTs from 68 cDNA libraries. Corresponds to reference sequence NM_024675.3. [UniGene 239701 - Hs.444664]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_078951.2 PALB2 gene product H. sapiens 100.0 1185
XP_510877.2 PREDICTED: partner and localizer of BRCA2 isoform 2 P. troglodytes 99.6 1185
NP_001074707.1 partner and localizer of BRCA2 M. musculus 68.8 1103
Other hits (2 of 14) [Show all]SpeciesId(%)Len(aa)
XP_003916727.1 PREDICTED: partner and localizer of BRCA2 P. anubis 94.7 1183
XP_001095569.2 PREDICTED: partner and localizer of BRCA2-like isoform 2 M. mulatta 92.3 1134

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; embryonic tissue; testis; lymph node; placenta; uncharacterized tissue; mixed; intestine; lung; mouth; mammary gland; trachea; skin; connective tissue; kidney; bone; pancreas; uterus; bladder; cervix; ascites; muscle; thyroid
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 16
Map position: 16p12.2
UniSTS entry: Chr 16 RH65008
UniSTS entry: Chr 16 RH68430 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

BC044254.2 Homo sapiens partner and localizer of BRCA2, mRNA (cDNA clone MGC:50910 IMAGE:6045564), complete cds PA
BX647130.1 Homo sapiens mRNA; cDNA DKFZp686H20166 (from clone DKFZp686H20166) PA
BX647125.1 Homo sapiens mRNA; cDNA DKFZp686O09166 (from clone DKFZp686O09166) PA
CR749637.1 Homo sapiens mRNA; cDNA DKFZp686E1054 (from clone DKFZp686E1054) PA
AK025469.1 Homo sapiens cDNA: FLJ21816 fis, clone HEP01116 PA
NM_024675.3 Homo sapiens partner and localizer of BRCA2 (PALB2), mRNA PA
AL834425.1 Homo sapiens mRNA; cDNA DKFZp667I166 (from clone DKFZp667I166) PA
AK299152.1 Homo sapiens cDNA FLJ60823 complete cds PA
AK097533.1 Homo sapiens cDNA FLJ40214 fis, clone TESTI2021124 P

EST sequences (10 of 110) [Show all sequences]

AI080603.1 Clone IMAGE:1680439 skin 3' read A
BX117589.1 Clone IMAGp998L081904_;_IMAGE:773527 embryonic tissue PA
AI697625.1 Clone IMAGE:2341192 lung 3' read PA
BX374578.2 Clone CS0DB007YB03 uncharacterized tissue 5' read P
BX389368.2 Clone CS0DB007YB03 uncharacterized tissue 5' read P
Z42703.1 Clone c-0re11 brain P
AI984799.1 Clone IMAGE:2494483 kidney 3' read A
CD652601.1 Clone IMAGE:30420986 embryonic tissue 5' read P
CD653027.1 Clone IMAGE:30420623 embryonic tissue 5' read P
CD654552.1 Clone IMAGE:30426852 embryonic tissue 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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