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UGID:231343     UniGene Hs.436306     Homo sapiens (human)   SPHKAP
SPHK1 interactor, AKAP domain containing (SPHKAP)

Human protein-coding gene SPHKAP. Represented by 55 ESTs from 30 cDNA libraries. EST representation biased toward heart; normal; fetus. Corresponds to 2 reference sequences (different isoforms). [UniGene 231343 - Hs.436306]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001136116.1 SPHKAP gene product H. sapiens 100.0 1699
NP_766018.3 Sphkap gene product M. musculus 77.7 1657
NP_001076514.1 A-kinase anchor protein SPHKAP D. rerio 51.7 1560
Other hits (2 of 18) [Show all]SpeciesId(%)Len(aa)
XP_001137841.1 PREDICTED: A-kinase anchor protein SPHKAP isoform 1 P. troglodytes 99.2 1699
XP_003908087.1 PREDICTED: A-kinase anchor protein SPHKAP isoform 2 P. anubis 95.8 1699

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: heart [show more like this]
normal [show more like this]
fetus [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; heart; lung; uncharacterized tissue; embryonic tissue; muscle
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 2
Map position: 2q36
UniSTS entry: Chr 2 RH11952 [Map Viewer]
UniSTS entry: Chr 2 WI-13872 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (12)

AK127071.1 Homo sapiens cDNA FLJ45128 fis, clone BRAWH3037265 P
AK125481.1 Homo sapiens cDNA FLJ43492 fis, clone OCBBF3009192
CR749494.1 Homo sapiens mRNA; cDNA DKFZp781H143 (from clone DKFZp781H143) PA
CR749297.1 Homo sapiens mRNA; cDNA DKFZp781J171 (from clone DKFZp781J171) PA
NM_030623.3 Homo sapiens SPHK1 interactor, AKAP domain containing (SPHKAP), transcript variant 2, mRNA PA
BC104954.1 Homo sapiens SPHK1 interactor, AKAP domain containing, mRNA (cDNA clone MGC:132614 IMAGE:8143957), complete cds P
BC104956.1 Homo sapiens SPHK1 interactor, AKAP domain containing, mRNA (cDNA clone MGC:132616 IMAGE:8143959), complete cds P
AB051465.1 Homo sapiens mRNA for KIAA1678 protein, partial cds P
AK095042.1 Homo sapiens cDNA FLJ37723 fis, clone BRHIP2019494, weakly similar to Homo sapiens A-kinase anchoring protein 220 mRNA P
AK090876.1 Homo sapiens cDNA FLJ33557 fis, clone BRAMY2009489, highly similar to Homo sapiens SPHK1 (sphingosine kinase type 1) interacting protein (SKIP), mRNA P
NM_001142644.1 Homo sapiens SPHK1 interactor, AKAP domain containing (SPHKAP), transcript variant 1, mRNA PA
BC143408.1 Homo sapiens cDNA clone IMAGE:9051915 P

EST sequences (10 of 55) [Show all sequences]

AA907283.1 Clone IMAGE:1521915 lung 3' read A
AA910564.1 Clone IMAGE:1518963 uncharacterized tissue 3' read
CB117706.1 Clone B1T694954-3-D05 brain 5' read
AA911338.1 Clone IMAGE:1417007 lung 3' read
R35003.1 Clone IMAGE:37071 brain 5' read
R38603.1 Clone IMAGE:26554 brain 3' read A
R15629.1 Clone G900-F heart
R49390.1 Clone IMAGE:37071 brain 3' read A
Z32823.1 Clone HEA32P heart
Z45301.1 Clone c-2ma11 brain


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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