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UGID:230292     UniGene Hs.435255     Homo sapiens (human)   UBXN6
UBX domain protein 6 (UBXN6)

Human protein-coding gene UBXN6. Represented by 470 ESTs from 220 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 230292 - Hs.435255]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_079517.1 UBXN6 gene product H. sapiens 100.0 440
XP_001138764.1 PREDICTED: UBX domain-containing protein 6 isoform 3 P. troglodytes 100.0 387
NP_077752.1 Ubxn6 gene product M. musculus 84.3 441
NP_001038245.1 ubxn6 gene product D. rerio 61.7 436
NP_001091263.1 UBX domain protein 6 X. laevis 60.9 427
Other hits (2 of 21) [Show all]SpeciesId(%)Len(aa)
XP_001102137.1 PREDICTED: UBX domain-containing protein 6-like isoform 2 M. mulatta 98.0 440
XP_003914744.1 PREDICTED: UBX domain-containing protein 6 P. anubis 98.0 440

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; eye; lung; mixed; uncharacterized tissue; prostate; skin; uterus; mammary gland; kidney; muscle; ovary; testis; pituitary gland; pancreas; heart; intestine; cervix; lymph node; stomach; blood; tonsil; lymph; salivary gland; spleen; ganglia; bladder; larynx; ear; ascites; liver; connective tissue; bone; embryonic tissue; pharynx; placenta; thyroid; parathyroid; adrenal gland; nerve; bone marrow; amniotic fluid; epididymis
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 19
Map position: 19p13
UniSTS entry: Chr 19 RH78272
UniSTS entry: Chr 19 G42939
UniSTS entry: Chr 19 RH67001
UniSTS entry: Chr 19 G34951
UniSTS entry: Chr 19 RH80339
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (7)

NM_025241.2 Homo sapiens UBX domain protein 6 (UBXN6), transcript variant 1, mRNA PA
AF272894.1 Homo sapiens UBX domain-containing protein 1 (UBXD1) mRNA, complete cds, alternatively spliced PA
AF272893.1 Homo sapiens UBX domain-containing protein 1 (UBXD1) mRNA, complete cds, alternatively spliced P
BC007414.2 Homo sapiens UBX domain protein 6, mRNA (cDNA clone IMAGE:2966731), partial cds PA
BC008288.1 Homo sapiens UBX domain protein 6, mRNA (cDNA clone MGC:11025 IMAGE:3659797), complete cds PA
BC017113.1 Homo sapiens UBX domain protein 6, mRNA (cDNA clone IMAGE:3613127), partial cds PA
NM_001171091.1 Homo sapiens UBX domain protein 6 (UBXN6), transcript variant 2, mRNA PA

EST sequences (10 of 470) [Show all sequences]

AA864270.1 Clone IMAGE:1460226 kidney 3' read A
AA969209.1 Clone IMAGE:1580371 mixed 3' read A
AA977290.1 Clone IMAGE:1589953 kidney 3' read A
R15261.1 Clone IMAGE:29872 brain 5' read
AA886991.1 Clone IMAGE:1493638 kidney 3' read
AI014686.1 Clone IMAGE:1639271 testis 3' read
AI015021.1 Clone IMAGE:1618291 testis 3' read A
AI022930.1 Clone IMAGE:1651748 skin 3' read A
AI027145.1 Clone IMAGE:1649435 parathyroid 3' read
AA928083.1 Clone IMAGE:1563529 mixed 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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