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UGID:229655     UniGene Hs.434618     Homo sapiens (human)   CNGA4
Cyclic nucleotide gated channel alpha 4 (CNGA4)

Human protein-coding gene CNGA4. Represented by 13 ESTs from 8 cDNA libraries. Corresponds to reference sequence NM_001037329.3. [UniGene 229655 - Hs.434618]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001032406.1 CNGA4 gene product H. sapiens 100.0 574
NP_001028489.1 Cnga4 gene product M. musculus 95.7 574
XP_002663442.2 PREDICTED: cyclic nucleotide-gated cation channel alpha-4 D. rerio 62.1 528
NP_499033.1 Protein TAX-4 C. elegans 49.9 381
NP_477116.1 Cyclic-nucleotide-gated ion channel protein, isoform A D. melanogaster 49.3 515
Other hits (2 of 39) [Show all]SpeciesId(%)Len(aa)
XP_003951858.1 PREDICTED: LOW QUALITY PROTEIN: cyclic nucleotide-gated cation channel alpha-4 P. troglodytes 99.5 574
XP_002708621.1 PREDICTED: cyclic nucleotide gated channel alpha 4 O. cuniculus 97.2 574

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: testis; lung; trachea; brain; intestine
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 11
Map position: 11p15.4
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (5)

AK122736.1 Homo sapiens cDNA FLJ16252 fis, clone HLUNG2014821, highly similar to CYCLIC-NUCLEOTIDE-GATED OLFACTORY CHANNEL OCNC2 SUBUNIT P
BC106935.2 Homo sapiens cDNA clone IMAGE:40033774 P
BC106936.2 Homo sapiens cDNA clone IMAGE:40033775 P
NM_001037329.3 Homo sapiens cyclic nucleotide gated channel alpha 4 (CNGA4), mRNA P
AK302551.1 Homo sapiens cDNA FLJ51400 complete cds, highly similar to Cyclic nucleotide-gated ol factory channel subunit OCNC2 P

EST sequences (13)

DA592386.1 Clone HLUNG2014821 lung 5' read P
DB238337.1 Clone TRACH3034260 trachea 5' read P
DB239487.1 Clone TRACH3035726 trachea 5' read P
DB319609.1 Clone HLUNG2014821 lung 3' read P
DC401064.1 Clone TESTI4012569 testis 5' read P
BI830763.1 Clone IMAGE:5167238 brain 5' read P
BM473083.1 Clone IMAGE:5574682 intestine 5' read
BQ429429.1 Clone IMAGE:6102176 testis 5' read
BU158634.1 Clone IMAGE:6009586 lung 5' read P
HY002711.1 Clone H04D009P06 testis P
HY025524.1 Clone H04D087E04 testis P
HY209303.1 Clone H04D087E04 testis P
HY217349.1 Clone H04D113D01 testis P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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