NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy

Query Tips
Build Info
Library Browser
Download UniGene

Related Databases

NIH cDNA Projects
Finding cDNAs

UGID:228834     UniGene Hs.433529     Homo sapiens (human)   RPS11
Ribosomal protein S11 (RPS11)

Human protein-coding gene RPS11. Represented by 3548 ESTs from 628 cDNA libraries. Corresponds to reference sequence NM_001015.4. [UniGene 228834 - Hs.433529]

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_038753.1 Rps11 gene product M. musculus 100.0 157
NP_112372.1 Rps11 gene product R. norvegicus 100.0 157
XP_001363138.1 PREDICTED: 40S ribosomal protein S11-like M. domestica 100.0 157
NP_001026004.1 RPS11 gene product G. gallus 100.0 157
XP_001115152.1 PREDICTED: 40S ribosomal protein S11 isoform 2 M. mulatta 100.0 157
XP_003915949.1 PREDICTED: 40S ribosomal protein S11 P. anubis 100.0 157
XP_001137522.1 PREDICTED: 40S ribosomal protein S11-like isoform 2 P. troglodytes 100.0 157
NP_001006.1 RPS11 gene product H. sapiens 100.0 157
XP_533619.2 PREDICTED: 40S ribosomal protein S11 isoform 3 C. lupus familiaris 100.0 157
XP_001492034.1 PREDICTED: 40S ribosomal protein S11-like E. caballus 100.0 157
NP_001230999.1 RPS11 gene product S. scrofa 100.0 157
NP_001019739.1 RPS11 gene product B. taurus 100.0 157
XP_004015421.1 PREDICTED: 40S ribosomal protein S11 O. aries 100.0 157
XP_002709911.1 PREDICTED: ribosomal protein S11-like O. cuniculus 100.0 157
XP_003203635.1 PREDICTED: 40S ribosomal protein S11-like, partial M. gallopavo 100.0 108
NP_001080676.1 40S ribosomal protein S11 X. laevis 97.5 157
NP_998542.1 rps11 gene product D. rerio 96.2 158
NP_725115.1 ribosomal protein S11, isoform B D. melanogaster 79.2 153
NP_010308.3 ribosomal 40S subunit protein S11A S. cerevisiae 76.9 155
XP_001702980.1 ribosomal protein S11, component of cytosolic 80S ribosome and 40S small subunit C. reinhardtii 73.7 155
XP_964961.1 40S ribosomal protein S11 N. crassa 73.3 160
NP_194809.1 40S ribosomal protein S11-2 A. thaliana 73.0 158
NP_502186.1 Protein RPS-11 C. elegans 72.3 154
Other hits (2 of 51) [Show all]SpeciesId(%)Len(aa)
NP_001005113.1 rps11 gene product X. tropicalis 99.4 157
NP_001232080.1 LOC100189964 gene product T. guttata 98.7 157

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; lung; prostate; mixed; embryonic tissue; liver; larynx; pancreas; stomach; intestine; eye; testis; muscle; uncharacterized tissue; bone; connective tissue; ovary; blood; skin; uterus; bone marrow; placenta; mammary gland; heart; kidney; vascular; mouth; lymph node; spleen; thymus; thyroid; umbilical cord; pharynx; salivary gland; ear; bladder; adrenal gland; parathyroid; lymph; ascites; tonsil; pituitary gland; pineal gland; cervix; adipose tissue; trachea; amniotic fluid; epididymis; nerve; spinal cord
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 19
Map position: 19q13.3
UniSTS entry: MARC_4679-4680:996679598:1
UniSTS entry: Chr 19 D11S4521
UniSTS entry: Chr 19 RH66611
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (11)

NM_001015.4 Homo sapiens ribosomal protein S11 (RPS11), mRNA P
BC070224.1 Homo sapiens ribosomal protein S11, mRNA (cDNA clone MGC:88205 IMAGE:4809182), complete cds PA
BC100025.1 Homo sapiens ribosomal protein S11, mRNA (cDNA clone MGC:111369 IMAGE:30565084), complete cds PA
BC007945.2 Homo sapiens ribosomal protein S11, mRNA (cDNA clone MGC:14322 IMAGE:4297932), complete cds PA
BC007603.1 Homo sapiens ribosomal protein S11, mRNA (cDNA clone MGC:15679 IMAGE:3350204), complete cds PA
BC007283.1 Homo sapiens ribosomal protein S11, mRNA (cDNA clone MGC:15628 IMAGE:3343839), complete cds PA
BC010028.2 Homo sapiens ribosomal protein S11, mRNA (cDNA clone MGC:19681 IMAGE:3357773), complete cds PA
BC016378.1 Homo sapiens ribosomal protein S11, mRNA (cDNA clone MGC:27330 IMAGE:4667201), complete cds PA
AK311809.1 Homo sapiens cDNA, FLJ92070, Homo sapiens ribosomal protein S11 (RPS11), mRNA P
BC018829.2 Homo sapiens ribosomal protein S11, mRNA (cDNA clone IMAGE:3343838) PA
X06617.1 Human mRNA for ribosomal protein S11 P

EST sequences (10 of 3548) [Show all sequences]

AA954153.1 Clone IMAGE:1591307 kidney 3' read PA
AA866155.1 Clone IMAGE:1469438 uncharacterized tissue 3' read A
AA961652.1 Clone IMAGE:1592673 kidney 3' read P
AA961661.1 Clone IMAGE:1592692 kidney 3' read P
AA961853.1 Clone IMAGE:1600362 uncharacterized tissue 3' read PA
AA962532.1 Clone IMAGE:1602206 lung 3' read P
AA922386.1 Clone IMAGE:1474408 intestine 3' read PA
AA922422.1 Clone IMAGE:1486391 mouth 3' read PA
AA922893.1 Clone IMAGE:1486239 mouth 3' read PA
AA971175.1 Clone IMAGE:1575403 kidney 3' read

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help