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UGID:224039     UniGene Hs.419800     Homo sapiens (human)   R3HCC1L
R3H domain and coiled-coil containing 1-like (R3HCC1L)

Human protein-coding gene R3HCC1L. Represented by 163 ESTs from 91 cDNA libraries. Corresponds to 5 reference sequences (different isoforms). [UniGene 224039 - Hs.419800]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001243548.1 R3HCC1L gene product H. sapiens 100.0 791
NP_803415.1 R3hcc1l gene product M. musculus 75.1 774
XP_690294.1 PREDICTED: growth inhibition and differentiation-related protein 88 homolog D. rerio 63.8 253
NP_647760.1 CG2162, isoform A D. melanogaster 51.0 198
Other hits (2 of 24) [Show all]SpeciesId(%)Len(aa)
XP_507968.2 PREDICTED: R3H and coiled-coil domain-containing protein 1-like isoform 8 P. troglodytes 98.8 777
XP_003919672.1 PREDICTED: LOW QUALITY PROTEIN: R3H and coiled-coil domain-containing protein 1-like P. anubis 95.2 623

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: testis; brain; pituitary gland; placenta; kidney; liver; uterus; pharynx; muscle; uncharacterized tissue; pancreas; connective tissue; blood; skin; vascular; trachea; lung; embryonic tissue; mouth; lymph; thymus; eye; adrenal gland; thyroid; mammary gland; mixed; intestine; epididymis; ovary; bone; adipose tissue; nerve
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 10
Map position: 10q24.2
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (16)

BC047908.1 Homo sapiens chromosome 10 open reading frame 28, mRNA (cDNA clone IMAGE:5725991), complete cds PA
AF525304.1 Homo sapiens growth inhibition and differentiation related protein 88 (GIDRP88) mRNA, complete cds PA
BC098359.1 Homo sapiens chromosome 10 open reading frame 28, mRNA (cDNA clone MGC:120641 IMAGE:40026912), complete cds P
BC098268.1 Homo sapiens chromosome 10 open reading frame 28, mRNA (cDNA clone MGC:120642 IMAGE:40026913), complete cds P
BC098175.1 Homo sapiens chromosome 10 open reading frame 28, mRNA (cDNA clone IMAGE:40026914), partial cds P
BC099848.1 Homo sapiens chromosome 10 open reading frame 28, mRNA (cDNA clone MGC:120644 IMAGE:40026916), complete cds P
BC009231.2 Homo sapiens chromosome 10 open reading frame 28, mRNA (cDNA clone IMAGE:3959816), partial cds PA
AK058187.1 Homo sapiens cDNA FLJ25458 fis, clone TST08962 P
AK292546.1 Homo sapiens cDNA FLJ78742 complete cds P
AK094479.1 Homo sapiens cDNA FLJ37160 fis, clone BRACE2026675 P
NM_001256620.1 Homo sapiens R3H domain and coiled-coil containing 1-like (R3HCC1L), transcript variant 3, mRNA PA
NM_001256619.1 Homo sapiens R3H domain and coiled-coil containing 1-like (R3HCC1L), transcript variant 1, mRNA PA
NM_001256621.1 Homo sapiens R3H domain and coiled-coil containing 1-like (R3HCC1L), transcript variant 5, mRNA PA
NM_138469.2 Homo sapiens R3H domain and coiled-coil containing 1-like (R3HCC1L), transcript variant 2, mRNA PA
NM_014472.4 Homo sapiens R3H domain and coiled-coil containing 1-like (R3HCC1L), transcript variant 4, mRNA PA
AF050198.1 Homo sapiens putative mitochondrial space protein 32.1 mRNA, nuclear gene encoding mitochondrial protein, complete cds P

EST sequences (10 of 163) [Show all sequences]

AA887876.1 Clone IMAGE:1160455 intestine 3' read A
AI344204.1 Clone IMAGE:2062695 intestine 3' read A
AI453689.1 Clone IMAGE:2143864 pancreas 3' read A
AI654913.1 Clone IMAGE:2309287 uncharacterized tissue 3' read A
CB268359.1 adipose tissue 5' read P
CB528783.1 Clone UI-H-FT2-bje-k-21-0-UI lung 3' read A
AI917413.1 Clone IMAGE:2237478 uncharacterized tissue 3' read A
CB998891.1 Clone IMAGE:30320549 vascular 5' read
AI868416.1 Clone IMAGE:2146814 mixed 3' read A
BX390530.2 Clone CS0DI079YN10 placenta 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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