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UGID:223646     UniGene Hs.418495     Homo sapiens (human)   C6orf57
Chromosome 6 open reading frame 57 (C6orf57)

Human protein-coding gene C6orf57. Represented by 40 ESTs from 30 cDNA libraries. Corresponds to reference sequence NM_145267.2. [UniGene 223646 - Hs.418495]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001108142.2 PREDICTED: UPF0369 protein C6orf57-like M. mulatta 100.0 107
XP_003897844.1 PREDICTED: UPF0369 protein C6orf57 homolog P. anubis 100.0 107
XP_527430.2 PREDICTED: UPF0369 protein C6orf57 homolog P. troglodytes 100.0 107
NP_660310.2 C6orf57 gene product H. sapiens 100.0 107
Other hits (2 of 7) [Show all]SpeciesId(%)Len(aa)
XP_003363780.1 PREDICTED: LOW QUALITY PROTEIN: UPF0369 protein C6orf57-like E. caballus 98.0 99
XP_002714458.1 PREDICTED: Chromosome 6 open reading frame 57-like O. cuniculus 90.8 86

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: pancreas; mixed; ovary; kidney; embryonic tissue; brain; uncharacterized tissue; placenta; bone marrow; liver; testis; heart; pharynx; eye; lung; ascites; lymph node; prostate
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 6
Map position: 6q13
UniSTS entry: Chr 1 D10S16
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (3)

BC104649.1 Homo sapiens chromosome 6 open reading frame 57, mRNA (cDNA clone MGC:104225 IMAGE:6713316), complete cds PA
BC018085.1 Homo sapiens chromosome 6 open reading frame 57, mRNA (cDNA clone MGC:26946 IMAGE:4817876), complete cds PA
NM_145267.2 Homo sapiens chromosome 6 open reading frame 57 (C6orf57), mRNA P

EST sequences (10 of 40) [Show all sequences]

R16669.1 Clone IMAGE:129641 mixed 5' read
BX115326.1 Clone IMAGp998O18135_;_IMAGE:129641 mixed P
AI300847.1 Clone IMAGE:1900447 kidney 3' read A
AI344488.1 Clone IMAGE:1917918 kidney 3' read A
AI769717.1 Clone IMAGE:2403299 kidney 3' read A
AI950532.1 Clone IMAGE:2547193 lung 3' read A
CD691597.1 pharynx
AW054719.1 Clone IMAGE:2566713 brain 3' read
AW195530.1 Clone IMAGE:2696099 kidney 3' read P
CF597237.1 Clone IMAGE:30705248 ovary 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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