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UGID:222563     UniGene Hs.414629     Homo sapiens (human)   CCL13
Chemokine (C-C motif) ligand 13 (CCL13)

Human protein-coding gene CCL13. Represented by 21 ESTs from 14 cDNA libraries. Corresponds to reference sequence NM_005408.2. [UniGene 222563 - Hs.414629]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_005399.1 CCL13 gene product H. sapiens 100.0 97
Other hits (2 of 3) [Show all]SpeciesId(%)Len(aa)
XP_001113462.1 PREDICTED: c-C motif chemokine 13 M. mulatta 94.9 97
XP_003912650.1 PREDICTED: c-C motif chemokine 13 P. anubis 94.9 97

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: uncharacterized tissue; mixed; pancreas; embryonic tissue; lung; intestine; brain; placenta; bone
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 17
Map position: 17q11.2
UniSTS entry: Chr 17 RH70645
UniSTS entry: Chr 17 RH45400
UniSTS entry: Chr 17 GDB:607778
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (10)

X98306.1 H.sapiens mRNA for monocyte chemoattractant protein 4 P
AJ001634.1 Homo sapiens mRNA for CC-chemokine MCP-4 PA
Z77650.1 H.sapiens mRNA for CC-chemokine PA
Z77651.1 H.sapiens mRNA for CC-chemokine (sequence variant) A
U59808.1 Human monocyte chemotactic protein-4 precursor (MCP-4) mRNA, complete cds PA
BT007385.1 Homo sapiens chemokine (C-C motif) ligand 13 mRNA, complete cds P
NM_005408.2 Homo sapiens chemokine (C-C motif) ligand 13 (CCL13), mRNA PA
CR450337.1 Homo sapiens full open reading frame cDNA clone RZPDo834B112D for gene CCL13, chemokine (C-C motif) ligand 13; complete cds; without stopcodon P
BC008621.1 Homo sapiens chemokine (C-C motif) ligand 13, mRNA (cDNA clone MGC:17134 IMAGE:4184250), complete cds PA
U46767.1 Homo sapiens monocyte chemoattractant protein-4 precursor (MCP-4) mRNA, complete cds PA

EST sequences (10 of 21) [Show all sequences]

BX119227.1 Clone IMAGp998B181865 embryonic tissue 5' read P
AI459919.1 Clone IMAGE:2151717 intestine 3' read
AI925360.1 Clone IMAGE:2449149 lung 3' read
AW015321.1 Clone IMAGE:2710047 uncharacterized tissue 3' read A
AW204819.1 Clone IMAGE:2719596 mixed 3' read A
CK902425.1 Clone IMAGE:6037839 pancreas 3' read A
CV025191.1 mixed 5' read P
BF339001.1 Clone IMAGE:4184250 brain 5' read P
BG620880.1 Clone IMAGE:4731075 placenta 5' read P
BM991948.1 Clone IMAGE:5868600 bone 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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