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UGID:220909     UniGene Hs.408073     Homo sapiens (human)   RPS6
Ribosomal protein S6 (RPS6)

Human protein-coding gene RPS6. Represented by 6511 ESTs from 814 cDNA libraries. Corresponds to reference sequence NM_001010.2. [UniGene 220909 - Hs.408073]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_003945386.1 PREDICTED: 40S ribosomal protein S6-like M. musculus 100.0 248
XP_003750019.1 PREDICTED: 40S ribosomal protein S6-like R. norvegicus 100.0 248
XP_001109421.1 PREDICTED: 40S ribosomal protein S6-like isoform 6 M. mulatta 100.0 248
XP_003891755.1 PREDICTED: 40S ribosomal protein S6-like P. anubis 100.0 248
XP_003312060.1 PREDICTED: 40S ribosomal protein S6 isoform 2 P. troglodytes 100.0 248
NP_001001.2 RPS6 gene product H. sapiens 100.0 248
NP_001239099.1 RPS6 gene product C. lupus familiaris 100.0 248
XP_001496413.1 PREDICTED: 40S ribosomal protein S6-like E. caballus 100.0 248
XP_003121938.1 PREDICTED: hypothetical protein LOC100038023 S. scrofa 100.0 248
NP_001015548.1 40S ribosomal protein S6 B. taurus 100.0 248
XP_004004443.1 PREDICTED: 40S ribosomal protein S6 O. aries 100.0 248
XP_002708126.1 PREDICTED: ribosomal protein S6-like O. cuniculus 100.0 248
XP_003213588.1 PREDICTED: 40S ribosomal protein S6-like M. gallopavo 100.0 203
XP_001363014.2 PREDICTED: 40S ribosomal protein S6-like isoform 1 M. domestica 99.6 248
NP_990556.1 RPS6 gene product G. gallus 99.6 248
NP_001080589.1 40S ribosomal protein S6 X. laevis 98.0 248
NP_001003728.1 zgc:92237 gene product D. rerio 97.6 248
NP_511073.1 ribosomal protein S6, isoform B D. melanogaster 87.1 247
XP_963431.1 40S ribosomal protein S6 N. crassa 77.4 238
NP_493435.1 Protein RPS-6, isoform a C. elegans 76.4 245
NP_194898.1 40S ribosomal protein S6-1 A. thaliana 75.1 249
NP_009740.3 ribosomal 40S subunit protein S6B S. cerevisiae 72.0 235
XP_001695102.1 ribosomal protein S6, component of cytosolic 80S ribosome and 40S small subunit C. reinhardtii 67.3 247
Other hits (2 of 53) [Show all]SpeciesId(%)Len(aa)
NP_001232556.1 LOC100190132 gene product T. guttata 99.2 248
XP_003216654.1 PREDICTED: 40S ribosomal protein S6-like A. carolinensis 98.8 248

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: prostate; lung; embryonic tissue; brain; pancreas; uterus; intestine; mixed; eye; skin; liver; blood; uncharacterized tissue; lymph; mammary gland; testis; placenta; kidney; ovary; muscle; bone; stomach; heart; bone marrow; tonsil; ascites; connective tissue; pharynx; cervix; lymph node; thyroid; umbilical cord; vascular; spleen; adrenal gland; pituitary gland; salivary gland; bladder; thymus; amniotic fluid; mouth; ear; adipose tissue; larynx; nerve; pineal gland; parathyroid; epididymis; esophagus; spinal cord; ganglia; trachea; peritoneum
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 9
Map position: 9p21
UniSTS entry: Chr 9 RH47306 [Map Viewer]
UniSTS entry: Chr 11 RH12529 [Map Viewer]
UniSTS entry: Chr 11 1192 [Map Viewer]
UniSTS entry: Chr 9 D9S785 [Map Viewer]
UniSTS entry: Chr X PMC112330P1
UniSTS entry: Chr 15 PMC112827P1
UniSTS entry: Chr 3 PMC102702P1
UniSTS entry: Chr 1 PMC153210P3
UniSTS entry: Chr 3 PMC351321P5
UniSTS entry: Chr 12 PMC24576P1
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (15)

NM_001010.2 Homo sapiens ribosomal protein S6 (RPS6), mRNA P
BC071908.1 Homo sapiens ribosomal protein S6, mRNA (cDNA clone MGC:88587 IMAGE:5089456), complete cds PA
BC071907.1 Homo sapiens ribosomal protein S6, mRNA (cDNA clone MGC:88586 IMAGE:4900361), complete cds PA
BC094826.1 Homo sapiens ribosomal protein S6, mRNA (cDNA clone MGC:104819 IMAGE:5481378), complete cds PA
J03537.1 Human ribosomal protein S6 mRNA, complete cds P
M20020.1 Human ribosomal protein S6 mRNA, complete cds P
BC000524.2 Homo sapiens ribosomal protein S6, mRNA (cDNA clone MGC:8597 IMAGE:2961137), complete cds PA
BC009427.2 Homo sapiens ribosomal protein S6, mRNA (cDNA clone IMAGE:3545844), partial cds PA
BC013296.2 Homo sapiens ribosomal protein S6, mRNA (cDNA clone MGC:3921 IMAGE:3030319), complete cds PA
AK291517.1 Homo sapiens cDNA FLJ78049 complete cds, highly similar to Homo sapiens ribosomal protein S6 (RPS6), mRNA P
AK311861.1 Homo sapiens cDNA, FLJ92127, Homo sapiens ribosomal protein S6 (RPS6), mRNA P
BC027620.1 Homo sapiens ribosomal protein S6, mRNA (cDNA clone MGC:27431 IMAGE:4698843), complete cds PA
AB062123.1 Homo sapiens OK/SW-cl.2 mRNA for ribosomal protein S6, complete cds PA
AK093634.1 Homo sapiens cDNA FLJ36315 fis, clone THYMU2005240, highly similar to 40S RIBOSOMAL PROTEIN S6 PA
BC035447.1 Homo sapiens ribosomal protein S6, mRNA (cDNA clone IMAGE:5141449) PA

EST sequences (10 of 6511) [Show all sequences]

AA954149.1 Clone IMAGE:1591318 kidney 3' read PA
AA961964.1 Clone IMAGE:1593805 kidney 3' read PA
AA962666.1 Clone IMAGE:1597502 uncharacterized tissue 3' read PA
AA968647.1 Clone IMAGE:1592254 kidney 3' read P
AA968958.1 Clone IMAGE:1574617 kidney 3' read P
AA969645.1 Clone IMAGE:1574700 kidney 3' read A
AA970346.1 Clone IMAGE:1576376 intestine 3' read PA
AA975639.1 Clone IMAGE:1591020 kidney 3' read A
AA977430.1 Clone IMAGE:1590639 kidney 3' read PA
AA977906.1 Clone IMAGE:1590922 kidney 3' read PA


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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