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UGID:131463     UniGene Hs.3887     Homo sapiens (human)   PSMD1
Proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 (PSMD1)

Human protein-coding gene PSMD1. Represented by 1217 ESTs from 383 cDNA libraries. Corresponds to 3 reference sequences (different isoforms). [UniGene 131463 - Hs.3887]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001113035.1 PREDICTED: 26S proteasome non-ATPase regulatory subunit 1-like M. mulatta 100.0 952
XP_003908110.1 PREDICTED: 26S proteasome non-ATPase regulatory subunit 1 isoform 1 P. anubis 100.0 952
NP_001233478.1 PSMD1 gene product P. troglodytes 100.0 952
NP_002798.2 PSMD1 gene product H. sapiens 100.0 952
XP_001498069.1 PREDICTED: 26S proteasome non-ATPase regulatory subunit 1 isoform 1 E. caballus 100.0 952
XP_001925937.3 PREDICTED: 26S proteasome non-ATPase regulatory subunit 1 S. scrofa 100.0 952
NP_081633.1 Psmd1 gene product M. musculus 99.9 952
XP_003433398.1 PREDICTED: 26S proteasome non-ATPase regulatory subunit 1 C. lupus familiaris 99.9 952
NP_001094547.1 PSMD1 gene product B. taurus 99.9 952
NP_114184.1 Psmd1 gene product R. norvegicus 99.7 952
NP_001089647.1 uncharacterized protein LOC734707 X. laevis 97.8 950
NP_957478.1 psmd1 gene product D. rerio 94.8 886
NP_651677.2 regulatory particle non-ATPase 2, isoform A D. melanogaster 73.1 1017
NP_171973.1 26S proteasome regulatory subunit N2 A. thaliana 58.9 996
XP_958036.1 hypothetical protein NCU09450 N. crassa 58.9 777
XP_001697173.1 26S proteasome regulatory subunit C. reinhardtii 56.5 1032
NP_012190.1 proteasome regulatory particle base subunit RPN2 S. cerevisiae 55.5 602
NP_498347.3 Protein RPN-2, isoform a C. elegans 51.5 491
Other hits (2 of 53) [Show all]SpeciesId(%)Len(aa)
XP_004005503.1 PREDICTED: 26S proteasome non-ATPase regulatory subunit 1 O. aries 99.5 961
NP_001012618.1 PSMD1 gene product G. gallus 99.2 954

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; lung; uncharacterized tissue; connective tissue; kidney; placenta; embryonic tissue; mouth; mixed; liver; ascites; vascular; eye; thymus; skin; prostate; mammary gland; lymph; uterus; intestine; trachea; muscle; stomach; ovary; adrenal gland; heart; blood; spleen; pancreas; ear; bone; umbilical cord; pituitary gland; cervix; larynx; tonsil; thyroid; esophagus; bladder; lymph node; pharynx; bone marrow
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 2
Map position: 2q37.1
UniSTS entry: Chr 2 SGC31713 [Map Viewer]
UniSTS entry: Chr 2 RH36032 [Map Viewer]
UniSTS entry: Chr 2 PSMD1
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (18)

BC047897.1 Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 1, mRNA (cDNA clone IMAGE:4445650), partial cds PA
NM_002807.3 Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 (PSMD1), transcript variant 1, mRNA P
BC064398.1 Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 1, mRNA (cDNA clone IMAGE:5530252), partial cds PA
BC073833.1 Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 1, mRNA (cDNA clone IMAGE:5104012), partial cds PA
BC094720.1 Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 1, mRNA (cDNA clone MGC:104523 IMAGE:4826340), complete cds PA
BC112344.1 Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 1, mRNA (cDNA clone MGC:133041 IMAGE:40008454), complete cds P
BC114434.1 Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 1, mRNA (cDNA clone MGC:133040 IMAGE:40008444), complete cds P
BC001053.2 Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 1, mRNA (cDNA clone IMAGE:3504722), partial cds PA
AK307415.1 Homo sapiens cDNA, FLJ97363 P
AK312528.1 Homo sapiens cDNA, FLJ92896, highly similar to Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 (PSMD1), mRNA P
BC032445.1 Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 1, mRNA (cDNA clone IMAGE:5111606), partial cds PA
BC020223.1 Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 1, mRNA (cDNA clone IMAGE:5087823), partial cds PA
BC014013.2 Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 1, mRNA (cDNA clone IMAGE:3956428), partial cds PA
BC007535.1 Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 1, mRNA (cDNA clone IMAGE:3163725), with apparent retained intron PA
NM_001191037.1 Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 (PSMD1), transcript variant 2, mRNA P
D44466.1 Homo sapiens mRNA for proteasome subunit p112, complete cds P
NR_034059.1 Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 (PSMD1), transcript variant 3, non-coding RNA P
BC039845.1 Homo sapiens, Similar to proteasome (prosome, macropain) 26S subunit, non-ATPase, 1, clone IMAGE:5553838, mRNA, partial cds PA

EST sequences (10 of 1217) [Show all sequences]

AA962721.1 Clone IMAGE:1573326 kidney 3' read P
AA903262.1 Clone IMAGE:1517308 uncharacterized tissue 3' read A
R14974.1 Clone IMAGE:129549 mixed 3' read
R16468.1 Clone IMAGE:129549 mixed 5' read P
AA993546.1 Clone IMAGE:1623233 embryonic tissue 3' read PA
AI015860.1 Clone IMAGE:1622262 embryonic tissue 3' read PA
AI090045.1 Clone IMAGE:1696630 uterus 3' read P
CB067004.1 Clone IMAGE: pancreas 3' read P
CB067274.1 Clone IMAGE: pancreas 5' read P
AI149236.1 Clone IMAGE:1721072 uterus 3' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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