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UGID:205972     UniGene Hs.386453     Homo sapiens (human)   PORCN
Porcupine homolog (Drosophila) (PORCN)

Human protein-coding gene PORCN. Represented by 109 ESTs from 66 cDNA libraries. Corresponds to 4 reference sequences (different isoforms). [UniGene 205972 - Hs.386453]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_982301.1 PORCN gene product H. sapiens 100.0 460
XP_521046.2 PREDICTED: protein-cysteine N-palmitoyltransferase porcupine, partial P. troglodytes 100.0 131
XP_003917717.1 PREDICTED: protein-cysteine N-palmitoyltransferase porcupine isoform 3 P. anubis 99.8 460
XP_001493606.1 PREDICTED: probable protein-cysteine N-palmitoyltransferase porcupine isoform 2 E. caballus 99.8 460
NP_076127.1 protein-cysteine N-palmitoyltransferase porcupine isoform Mporc-d M. musculus 98.0 460
NP_001081423.1 porcupine homolog X. laevis 80.7 460
NP_001119953.1 probable protein-cysteine N-palmitoyltransferase porcupine D. rerio 74.6 441
Other hits (2 of 22) [Show all]SpeciesId(%)Len(aa)
NP_001094678.1 PORCN gene product B. taurus 99.3 449
XP_003435555.1 PREDICTED: probable protein-cysteine N-palmitoyltransferase porcupine C. lupus familiaris 99.1 460

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; adrenal gland; connective tissue; pharynx; pancreas; eye; mixed; intestine; uncharacterized tissue; uterus; thyroid; mammary gland; cervix; blood; kidney; embryonic tissue; prostate; mouth; trachea; muscle; lung; ovary; heart; salivary gland; bone; liver
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: X
Map position: Xp11.23
UniSTS entry: Chr X RH17606 [Map Viewer]
UniSTS entry: Chr X DXS7465E
UniSTS entry: Chr X DXS9869E
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (15)

NM_203475.1 Homo sapiens porcupine homolog (Drosophila) (PORCN), transcript variant D, mRNA P
NM_203474.1 Homo sapiens porcupine homolog (Drosophila) (PORCN), transcript variant C, mRNA P
NM_203473.1 Homo sapiens porcupine homolog (Drosophila) (PORCN), transcript variant B, mRNA P
AF317058.1 Homo sapiens porcupine isoform D mRNA, complete cds P
AF317059.1 Homo sapiens porcupine isoform B mRNA, complete cds P
AF317060.1 Homo sapiens porcupine isoform C mRNA, complete cds P
AF317061.1 Homo sapiens porcupine isoform A mRNA, complete cds P
NM_022825.2 Homo sapiens porcupine homolog (Drosophila) (PORCN), transcript variant A, mRNA P
AK057727.1 Homo sapiens cDNA FLJ33165 fis, clone UTERU2000546, highly similar to Probable protein-cysteine N-palmitoyltransferase porcupine (EC 2.3.1.-) P
AK056340.1 Homo sapiens cDNA FLJ31778 fis, clone NT2RI2008188 P
BC019080.2 Homo sapiens porcupine homolog (Drosophila), mRNA (cDNA clone MGC:29687 IMAGE:4559533), complete cds PA
AK314745.1 Homo sapiens cDNA, FLJ95608, highly similar to Homo sapiens likely ortholog of mouse porcupine homolog(Drosophila) (PPN), mRNA P
AK293347.1 Homo sapiens cDNA FLJ53465 complete cds, highly similar to Probable protein-cysteineN-palmitoyltransferase porcupine (EC 2.3.1.-) PA
L08239.1 Human MG61 mRNA, partial cds P
AK316378.1 Homo sapiens cDNA, FLJ79277 complete cds, highly similar to Probable protein-cysteineN-palmitoyltransferase porcupine (EC 2.3.1.-) PA

EST sequences (10 of 109) [Show all sequences]

AA907337.1 Clone IMAGE:1524247 mixed 3' read A
AA928142.1 Clone IMAGE:1541827 mixed 3' read A
AA906768.1 Clone IMAGE:1476659 uncharacterized tissue 3' read
CB118550.1 Clone L13SNU387-1-A11 liver 5' read
BX280036.1 Clone IMAGp998L1710105_;_IMAGE:4400416 intestine P
AI922683.1 Clone IMAGE:2455021 pancreas 3' read A
AI932628.1 Clone IMAGE:2454451 pancreas 3' read A
CD172187.1 Clone IMAGE:30375708 brain 5' read P
CD172404.1 Clone IMAGE:30377438 brain 5' read P
AW385394.1 uncharacterized tissue P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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