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UGID:204118     UniGene Hs.381072     Homo sapiens (human)   PPIF
Peptidylprolyl isomerase F (PPIF)

Human protein-coding gene PPIF. Represented by 928 ESTs from 333 cDNA libraries. Corresponds to reference sequence NM_005729.3. [UniGene 204118 - Hs.381072]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_507866.2 PREDICTED: peptidyl-prolyl cis-trans isomerase F, mitochondrial isoform 5 P. troglodytes 100.0 206
NP_005720.1 PPIF gene product H. sapiens 100.0 206
NP_598845.1 Ppif gene product M. musculus 97.1 205
NP_001244046.1 peptidyl-prolyl cis-trans isomerase F, mitochondrial X. laevis 85.5 199
NP_001032199.1 ppifb gene product D. rerio 84.9 184
NP_729966.1 CG7768 D. melanogaster 83.8 160
NP_010439.1 peptidylprolyl isomerase CPR1 S. cerevisiae 79.2 158
XP_001700372.1 peptidyl-prolyl cis-trans isomerase, cyclophilin-type C. reinhardtii 77.7 169
NP_179251.1 Peptidyl-prolyl cis-trans isomerase CYP19-1 A. thaliana 75.9 169
NP_506749.1 Protein CYN-7 C. elegans 74.4 167
XP_965017.1 hypothetical protein NCU02614 N. crassa 66.3 180
Other hits (2 of 67) [Show all]SpeciesId(%)Len(aa)
XP_001090367.1 PREDICTED: peptidyl-prolyl cis-trans isomerase F, mitochondrial M. mulatta 99.0 206
XP_003903766.1 PREDICTED: peptidyl-prolyl cis-trans isomerase F, mitochondrial P. anubis 99.0 206

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; prostate; lung; uncharacterized tissue; placenta; testis; blood; intestine; skin; lymph; liver; mixed; umbilical cord; uterus; embryonic tissue; kidney; stomach; bladder; salivary gland; ascites; mammary gland; muscle; heart; adrenal gland; spleen; vascular; thyroid; thymus; eye; cervix; lymph node; pharynx; ovary; pancreas; bone; bone marrow; mouth; connective tissue; trachea; parathyroid; esophagus; nerve
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 10
Map position: 10q22-q23
UniSTS entry: Chr 10 D10S2355 [Map Viewer]
UniSTS entry: Chr 10 A006B47 [Map Viewer]
UniSTS entry: Chr 10 G20689
UniSTS entry: Chr 10 D10S1558 [Map Viewer]
UniSTS entry: Chr 10 RH102938
UniSTS entry: Chr 10 SHGC-82268
UniSTS entry: Chr 10 WI-20925 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (7)

NM_005729.3 Homo sapiens peptidylprolyl isomerase F (PPIF), nuclear gene encoding mitochondrial protein, mRNA PA
M80254.1 H.sapiens cyclophilin isoform (hCyP3) mRNA, complete cds P
BC110299.1 Homo sapiens peptidylprolyl isomerase F, mRNA (cDNA clone MGC:117207 IMAGE:5215228), complete cds PA
BC005020.1 Homo sapiens peptidylprolyl isomerase F, mRNA (cDNA clone MGC:11022 IMAGE:3659599), complete cds PA
AK312757.1 Homo sapiens cDNA, FLJ93167, highly similar to Homo sapiens peptidylprolyl isomerase F (cyclophilin F) (PPIF),mRNA P
AK296669.1 Homo sapiens cDNA FLJ54295 complete cds, highly similar to Peptidyl-prolyl cis-trans isomerase, mitochondrial precursor (EC 5.2.1.8) P
BC013204.1 Homo sapiens peptidylprolyl isomerase F, mRNA (cDNA clone IMAGE:4155608) PA

EST sequences (10 of 928) [Show all sequences]

AA970769.1 Clone IMAGE:1576475 intestine 3' read A
R15229.1 Clone IMAGE:29862 brain 5' read P
AA926999.1 Clone IMAGE:1542157 mixed 3' read A
AI042340.1 Clone IMAGE:1668058 parathyroid 3' read
AI052431.1 Clone IMAGE:1674662 mixed 3' read A
R20238.1 Clone IMAGE:32677 brain 5' read
AI077679.1 Clone IMAGE:1664480 skin 3' read A
AI090557.1 Clone IMAGE:1691572 heart 3' read A
AA862678.1 Clone IMAGE:1469608 uncharacterized tissue 3' read A
AI128481.1 Clone IMAGE:1711971 uterus 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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