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UGID:200729     UniGene Hs.374588     Homo sapiens (human)   RPL17
Ribosomal protein L17 (RPL17)

Human protein-coding gene RPL17. Represented by 1063 ESTs from 365 cDNA libraries. Corresponds to 9 reference sequences (different isoforms). [UniGene 200729 - Hs.374588]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001186284.1 RPL17-C18orf32 gene product H. sapiens 100.0 227
NP_001002239.2 60S ribosomal protein L17 M. musculus 100.0 183
NP_958818.1 Rpl17 gene product R. norvegicus 100.0 183
XP_001365329.1 PREDICTED: 60S ribosomal protein L17-like M. domestica 100.0 183
NP_001070168.1 RPL17 gene product T. guttata 100.0 183
XP_001231654.1 PREDICTED: 60S ribosomal protein L17-like G. gallus 100.0 183
XP_003429123.1 PREDICTED: 60S ribosomal protein L17-like isoform 2 O. anatinus 100.0 183
XP_001096059.1 PREDICTED: 60S ribosomal protein L17-like M. mulatta 100.0 183
XP_003914417.1 PREDICTED: 60S ribosomal protein L17-like P. anubis 100.0 183
XP_001164527.1 PREDICTED: 60S ribosomal protein L17-like isoform 2 P. troglodytes 100.0 183
XP_537346.1 PREDICTED: 60S ribosomal protein L17 isoform 1 C. lupus familiaris 100.0 183
XP_003365594.1 PREDICTED: 60S ribosomal protein L17 isoform 1 E. caballus 100.0 183
NP_001231487.1 RPL17 gene product S. scrofa 100.0 183
NP_001029631.1 RPL17 gene product B. taurus 100.0 183
XP_004003220.1 PREDICTED: 60S ribosomal protein L17-like O. aries 100.0 183
XP_002709431.1 PREDICTED: ribosomal protein L17-like O. cuniculus 100.0 183
NP_001159771.1 ribosomal protein L17 X. laevis 98.9 183
NP_001229966.1 60S ribosomal protein L17 D. rerio 97.8 183
NP_572346.1 ribosomal protein L17, isoform D D. melanogaster 75.8 185
NP_740781.1 Protein RPL-17, isoform a C. elegans 73.5 184
NP_174060.1 60S ribosomal protein L17-1 A. thaliana 68.8 175
XP_961479.2 60S ribosomal protein L17 N. crassa 66.8 181
XP_001693454.1 ribosomal protein L17, component of cytosolic 80S ribosome and 60S large subunit C. reinhardtii 65.0 185
NP_012358.1 Rpl17bp S. cerevisiae 59.8 183
Other hits (2 of 50) [Show all]SpeciesId(%)Len(aa)
XP_003213392.1 PREDICTED: 60S ribosomal protein L17-like, partial M. gallopavo 99.4 168
XP_003965424.1 PREDICTED: 60S ribosomal protein L17-like T. rubripes 98.4 183

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: lung; prostate; brain; embryonic tissue; uterus; skin; pancreas; intestine; blood; liver; ovary; uncharacterized tissue; vascular; heart; kidney; bone; lymph; mixed; placenta; amniotic fluid; eye; stomach; esophagus; mammary gland; umbilical cord; muscle; nerve; testis; spleen; thymus; ear; bone marrow; thyroid; tonsil; pharynx; bladder; connective tissue; lymph node; ascites; trachea; adrenal gland; salivary gland; larynx; cervix; mouth; pituitary gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 18
Map position: 18q21
UniSTS entry: Chr 1 D17S1714
UniSTS entry: Chr 18 D18S1247 [Map Viewer]
UniSTS entry: Chr 11 WI-17439 [Map Viewer]
UniSTS entry: Chr 18 RH70037 [Map Viewer]
UniSTS entry: Chr 18 SGC30182 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (11)

NM_000985.4 Homo sapiens ribosomal protein L17 (RPL17), transcript variant 1, mRNA PA
NM_001035006.2 Homo sapiens ribosomal protein L17 (RPL17), transcript variant 2, mRNA PA
BC000502.2 Homo sapiens ribosomal protein L17, mRNA (cDNA clone MGC:8457 IMAGE:2821464), complete cds PA
X53777.1 Human L23 mRNA for putative ribosomal protein PA
NM_001199355.1 Homo sapiens RPL17-C18orf32 readthrough (RPL17-C18orf32), transcript variant 1, mRNA P
NM_001199345.1 Homo sapiens ribosomal protein L17 (RPL17), transcript variant 8, mRNA PA
NM_001199344.1 Homo sapiens ribosomal protein L17 (RPL17), transcript variant 7, mRNA PA
NM_001199343.1 Homo sapiens ribosomal protein L17 (RPL17), transcript variant 6, mRNA PA
NM_001199342.1 Homo sapiens ribosomal protein L17 (RPL17), transcript variant 5, mRNA PA
NM_001199341.1 Homo sapiens ribosomal protein L17 (RPL17), transcript variant 4, mRNA PA
NM_001199340.1 Homo sapiens ribosomal protein L17 (RPL17), transcript variant 3, mRNA PA

EST sequences (10 of 1063) [Show all sequences]

AA865037.1 Clone IMAGE:1459465 kidney 3' read P
AA962690.1 Clone IMAGE:1575466 intestine 3' read A
AI002192.1 Clone IMAGE:1593143 kidney 3' read P
AA907086.1 Clone IMAGE:1522366 lung 3' read
CB049191.1 Clone IMAGE:3271272 prostate 3' read PA
CB050400.1 Clone IMAGE:3272000 prostate 3' read PA
CB050401.1 Clone IMAGE:3272000 prostate 5' read P
AI207180.1 Clone IMAGE:1941441 uncharacterized tissue 3' read A
CB113657.1 Clone L5HLK1-15-A10 liver 5' read
CB115118.1 Clone L10ChoCK0-2-G01 liver 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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