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UGID:199435     UniGene Hs.371718     Homo sapiens (human)   GTF3C1
General transcription factor IIIC, polypeptide 1, alpha 220kDa (GTF3C1)

Human protein-coding gene GTF3C1. Represented by 505 ESTs from 235 cDNA libraries. Corresponds to reference sequence NM_001520.3. [UniGene 199435 - Hs.371718]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001511.2 GTF3C1 gene product H. sapiens 100.0 2108
XP_510894.3 PREDICTED: general transcription factor 3C polypeptide 1 P. troglodytes 99.9 1987
NP_997122.1 general transcription factor 3C polypeptide 1 M. musculus 87.0 2100
XP_002660721.2 PREDICTED: general transcription factor 3C polypeptide 1-like D. rerio 56.8 804
Other hits (2 of 16) [Show all]SpeciesId(%)Len(aa)
XP_001101688.1 PREDICTED: general transcription factor 3C polypeptide 1 isoform 2 M. mulatta 99.0 2108
XP_003916757.1 PREDICTED: general transcription factor 3C polypeptide 1 P. anubis 99.0 2108

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; lung; intestine; testis; embryonic tissue; eye; uterus; skin; mammary gland; uncharacterized tissue; pancreas; placenta; thyroid; kidney; prostate; liver; muscle; larynx; spleen; cervix; vascular; trachea; lymph; ovary; thymus; lymph node; mouth; mixed; blood; bone marrow; connective tissue; pituitary gland; stomach; umbilical cord; spinal cord; ascites; ganglia; nerve; bone; adipose tissue; pineal gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 16
Map position: 16p12
UniSTS entry: Chr 16 STS-U02619 [Map Viewer]
UniSTS entry: Chr 16 PMC18813P1
UniSTS entry: Chr 16 GTF3C1_3378
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

BC044857.2 Homo sapiens general transcription factor IIIC, polypeptide 1, alpha 220kDa, mRNA (cDNA clone IMAGE:5113502), partial cds PA
BC052642.1 Homo sapiens general transcription factor IIIC, polypeptide 1, alpha 220kDa, mRNA (cDNA clone IMAGE:6138423), partial cds PA
BX648143.1 Homo sapiens mRNA; cDNA DKFZp686O0870 (from clone DKFZp686O0870) PA
NM_001520.3 Homo sapiens general transcription factor IIIC, polypeptide 1, alpha 220kDa (GTF3C1), mRNA P
CR627430.1 Homo sapiens mRNA; cDNA DKFZp686A111 (from clone DKFZp686A111) PA
BC151847.1 Homo sapiens cDNA clone IMAGE:8860443, containing frame-shift errors P
U02619.1 Human TFIIIC Box B-binding subunit mRNA, complete cds P
BC137229.1 Homo sapiens general transcription factor IIIC, polypeptide 1, alpha 220kDa, mRNA (cDNA clone MGC:168849 IMAGE:9021226), complete cds P
U06485.1 Human transcription factor TFIIIC alpha subunit mRNA, partial cds P

EST sequences (10 of 505) [Show all sequences]

R15854.1 Clone IMAGE:53322 brain 3' read A
AA991483.1 Clone IMAGE:1612753 uncharacterized tissue 3' read A
BX092066.1 Clone IMAGp998D1017_;_IMAGE:53322 brain A
AI198025.1 Clone IMAGE:1859901 brain 3' read P
AI318113.1 Clone IMAGE:1912191 intestine 3' read A
AI337878.1 Clone IMAGE:1949857 uterus 3' read A
AI351914.1 Clone IMAGE:1933250 mixed 3' read A
AI362346.1 Clone IMAGE:1989046 uterus 3' read A
AI369361.1 Clone IMAGE:2019449 brain 3' read P
AI567980.1 Clone IMAGE:2215725 ovary 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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