NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
Finding cDNAs

UGID:198092     UniGene Hs.369448     Homo sapiens (human)   FRAS1
Fraser syndrome 1 (FRAS1)

Human protein-coding gene FRAS1. Represented by 160 ESTs from 91 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 198092 - Hs.369448]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_079350.5 FRAS1 gene product H. sapiens 100.0 4011
NP_780682.3 Fras1 gene product M. musculus 89.3 4009
NP_001124312.1 extracellular matrix protein FRAS1 D. rerio 71.9 3933
Other hits (2 of 21) [Show all]SpeciesId(%)Len(aa)
XP_517202.2 PREDICTED: extracellular matrix protein FRAS1 P. troglodytes 99.4 4011
XP_003898773.1 PREDICTED: extracellular matrix protein FRAS1 P. anubis 95.9 3838

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; lung; embryonic tissue; mixed; uncharacterized tissue; placenta; intestine; testis; muscle; ovary; vascular; stomach; eye; kidney; mammary gland; mouth; thyroid; uterus; heart; liver; pituitary gland; connective tissue; bone; adrenal gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 4
Map position: 4q21.21
UniSTS entry: Chr 4 SHGC-16556
UniSTS entry: Chr 4 RH15875 [Map Viewer]
UniSTS entry: Chr 4 SHGC4-1840
UniSTS entry: Chr 4 D4S2602E
UniSTS entry: Chr 4 SGC32653 [Map Viewer]
UniSTS entry: Chr 4 SHGC-60067
UniSTS entry: Chr 4 G34409
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (20)

BC052281.1 Homo sapiens Fraser syndrome 1, mRNA (cDNA clone IMAGE:3926947), partial cds PA
BX647949.1 Homo sapiens mRNA; cDNA DKFZp686E1251 (from clone DKFZp686E1251) PA
BX647420.1 Homo sapiens mRNA; cDNA DKFZp686P08111 (from clone DKFZp686P08111) PA
BC064487.1 Homo sapiens Fraser syndrome 1, mRNA (cDNA clone IMAGE:3834928), partial cds PA
AL157471.1 Homo sapiens mRNA; cDNA DKFZp761P1423 (from clone DKFZp761P1423) PA
CR627393.1 Homo sapiens mRNA; cDNA DKFZp686I05113 (from clone DKFZp686I05113) PA
AB040933.2 Homo sapiens mRNA for KIAA1500 protein, partial cds P
BC094853.1 Homo sapiens Fraser syndrome 1, mRNA (cDNA clone IMAGE:5020583) PA
AK025684.1 Homo sapiens cDNA: FLJ22031 fis, clone HEP08734 PA
NM_025074.6 Homo sapiens Fraser syndrome 1 (FRAS1), transcript variant 1, mRNA PA
AK027833.1 Homo sapiens cDNA FLJ14927 fis, clone PLACE1009094, weakly similar to FURIN-LIKE PROTEASE 2 PRECURSOR (EC 3.4.21.75) P
BC131821.1 Homo sapiens Fraser syndrome 1, mRNA (cDNA clone IMAGE:40126801), complete cds P
BC131820.1 Homo sapiens Fraser syndrome 1, mRNA (cDNA clone IMAGE:40126796), complete cds P
AK096838.1 Homo sapiens cDNA FLJ39519 fis, clone PUAEN2001260
AK092082.1 Homo sapiens cDNA FLJ34763 fis, clone NT2NE2002186 P
AL833581.1 Homo sapiens mRNA; cDNA DKFZp686M0356 (from clone DKFZp686M0356) PA
AL831853.1 Homo sapiens mRNA; cDNA DKFZp761C1517 (from clone DKFZp761C1517) PA
BC020192.1 Homo sapiens Fraser syndrome 1, mRNA (cDNA clone IMAGE:4111654), partial cds PA
BC009254.2 Homo sapiens Fraser syndrome 1, mRNA (cDNA clone IMAGE:3028776), partial cds PA
NM_001166133.1 Homo sapiens Fraser syndrome 1 (FRAS1), transcript variant 2, mRNA PA

EST sequences (10 of 160) [Show all sequences]

R14543.1 Clone IMAGE:29217 brain 5' read
R16418.1 Clone IMAGE:129320 mixed 5' read
AI001790.1 Clone IMAGE:1619377 testis 3' read A
R19232.1 Clone IMAGE:33027 brain 5' read
AA928909.1 Clone IMAGE:1568287 lung 3' read
R19840.1 Clone IMAGE:33837 brain 5' read
AI300987.1 Clone IMAGE:1908385 lung 3' read A
AI358195.1 Clone IMAGE:1989454 uterus 3' read A
R46219.1 Clone IMAGE:152498 mammary gland 3' read
R45939.1 Clone IMAGE:33837 brain 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help