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UGID:195932     UniGene Hs.362854     Homo sapiens (human)   C1QTNF9
C1q and tumor necrosis factor related protein 9 (C1QTNF9)

Human protein-coding gene C1QTNF9. Represented by 57 ESTs from 6 cDNA libraries. EST representation biased toward pharynx; adult. Corresponds to reference sequence NM_178540.3. [UniGene 195932 - Hs.362854]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_848635.2 C1QTNF9 gene product H. sapiens 100.0 332
NP_898998.2 C1qtnf9 gene product M. musculus 84.9 332
NP_001107934.1 c1qtnf9 gene product D. rerio 59.0 306
NP_001089312.1 collagen, type IX, alpha 2 precursor X. laevis 45.6 184
Other hits (2 of 38) [Show all]SpeciesId(%)Len(aa)
XP_001152983.1 PREDICTED: complement C1q and tumor necrosis factor-related protein 9A isoform 1 P. troglodytes 98.8 332
XP_003913724.1 PREDICTED: complement C1q and tumor necrosis factor-related protein 9A isoform 1 P. anubis 97.6 332

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: pharynx [show more like this]
adult [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: pharynx; mixed; testis; ganglia; bone
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 13
Map position: 13q12.12
UniSTS entry: Chr 13 RH102138
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (3)

NM_178540.3 Homo sapiens C1q and tumor necrosis factor related protein 9 (C1QTNF9), mRNA PA
AY358145.1 Homo sapiens clone DNA172209 RIWW6503 (UNQ6503) mRNA, complete cds PA
BC040438.1 Homo sapiens C1q and tumor necrosis factor related protein 9, mRNA (cDNA clone MGC:48915 IMAGE:5227612), complete cds PA

EST sequences (10 of 57) [Show all sequences]

AW983589.1 pharynx
AW983592.1 pharynx
AW983593.1 pharynx
AW983594.1 pharynx
AW983601.1 pharynx
AW983602.1 pharynx
AW983603.1 pharynx
AW983604.1 pharynx
AW983605.1 pharynx
AW983607.1 pharynx


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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