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UGID:193620     UniGene Hs.348979     Homo sapiens (human)   RRN3P1
RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 1 (RRN3P1)

Human pseudo gene RRN3P1. Represented by 76 ESTs from 50 cDNA libraries. Corresponds to reference sequence NR_003370.2. [UniGene 193620 - Hs.348979]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001152385.1 PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like, partial P. troglodytes 95.2 104
NP_060897.3 RRN3 gene product H. sapiens 93.8 510
NP_001034610.1 RNA polymerase I-specific transcription initiation factor RRN3 M. musculus 89.6 501
NP_001107876.1 RRN3 RNA polymerase I transcription factor homolog X. laevis 73.3 482
XP_706962.2 PREDICTED: hypothetical protein isoform 2 D. rerio 67.5 476
Other hits (2 of 21) [Show all]SpeciesId(%)Len(aa)
XP_003362032.1 PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3, partial S. scrofa 93.8 144
XP_002711789.1 PREDICTED: RRN3 RNA polymerase I transcription factor homolog O. cuniculus 93.6 515

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; uncharacterized tissue; ovary; embryonic tissue; lymph node; muscle; eye; uterus; lung; lymph; thymus; mixed; thyroid; heart; placenta; testis; mammary gland; kidney; prostate; bone marrow
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 16
Map position: 16p12.2
UniSTS entry: Chr 16 RH102369
UniSTS entry: Chr 1 D10S16
UniSTS entry: Chr 16 SHGC-31413 [Map Viewer]
UniSTS entry: Chr 16 RH65913 [Map Viewer]
UniSTS entry: Chr 1 D1S1361
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (11)

AK126166.1 Homo sapiens cDNA FLJ44178 fis, clone THYMU2037233, highly similar to RNA polymerase I-specific transcription initiation factor RRN3 P
BC068999.1 Homo sapiens RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene, mRNA (cDNA clone IMAGE:5093011) PA
BC070157.1 Homo sapiens cDNA clone IMAGE:4617650, partial cds A
BC112115.1 Homo sapiens RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene, mRNA (cDNA clone IMAGE:8327583) P
BC112117.1 Homo sapiens RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene, mRNA (cDNA clone IMAGE:8327585) P
BC006441.1 Homo sapiens RNA polymerase I transcription factor RRN3-like, mRNA (cDNA clone IMAGE:3351791) PA
BC009198.2 Homo sapiens RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene, mRNA (cDNA clone IMAGE:3678732) PA
AK291749.1 Homo sapiens cDNA FLJ77916 complete cds P
AK309501.1 Homo sapiens cDNA, FLJ99542
BC143685.1 Homo sapiens cDNA clone IMAGE:9052199 P
NR_003370.2 Homo sapiens RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 1 (RRN3P1), non-coding RNA PA

EST sequences (10 of 76) [Show all sequences]

AA973191.1 Clone IMAGE:1564262 mixed 3' read
AA992868.1 Clone IMAGE:1622671 embryonic tissue 3' read A
AA993002.1 Clone IMAGE:1622719 embryonic tissue 3' read A
BX101439.1 Clone IMAGp998M071155_;_IMAGE:485934 uterus P
AI279624.1 Clone IMAGE:1882431 lung 3' read A
AI341439.1 Clone IMAGE:2009910 uncharacterized tissue 3' read A
AI631543.1 Clone IMAGE:2304298 uncharacterized tissue 3' read A
AI650371.1 Clone IMAGE:2303414 uncharacterized tissue 3' read A
AI652497.1 Clone IMAGE:2307125 uncharacterized tissue 3' read A
AI656056.1 Clone IMAGE:2243514 uncharacterized tissue 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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