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UGID:192855     UniGene Hs.345877     Homo sapiens (human)   LOXHD1
Lipoxygenase homology domains 1 (LOXHD1)

Human protein-coding gene LOXHD1. Represented by 68 ESTs from 18 cDNA libraries. EST representation biased toward testis; adult. Corresponds to 4 reference sequences (different isoforms). [UniGene 192855 - Hs.345877]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_653213.6 LOXHD1 gene product H. sapiens 100.0 2210
XP_001146229.1 PREDICTED: lipoxygenase homology domain-containing protein 1 isoform 3 P. troglodytes 99.5 1113
NP_766422.2 Loxhd1 gene product M. musculus 85.1 2067
XP_001920640.2 PREDICTED: lipoxygenase homology domain-containing protein 1 D. rerio 59.2 2147
Other hits (2 of 19) [Show all]SpeciesId(%)Len(aa)
XP_003914395.1 PREDICTED: lipoxygenase homology domain-containing protein 1-like, partial P. anubis 98.8 1661
XP_001090494.2 PREDICTED: hypothetical protein LOC702221 M. mulatta 98.6 2214

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: testis [show more like this]
adult [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: testis; placenta; blood; mixed; uncharacterized tissue; brain; lung; prostate
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 18
Map position: 18q21.1
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (10)

BC047720.1 Homo sapiens lipoxygenase homology domains 1, mRNA (cDNA clone IMAGE:5744804), complete cds PA
BX647229.1 Homo sapiens mRNA; cDNA DKFZp686K1936 (from clone DKFZp686K1936) PA
AK127869.1 Homo sapiens cDNA FLJ45972 fis, clone PLACE7018304 P
AK057232.1 Homo sapiens cDNA FLJ32670 fis, clone TESTI1000127, weakly similar to POLYCYSTIN PRECURSOR P
NM_144612.6 Homo sapiens lipoxygenase homology domains 1 (LOXHD1), transcript variant 1, mRNA P
AK302848.1 Homo sapiens cDNA FLJ55628 complete cds, highly similar to Homo sapiens lipoxygenase homology domains 1 (LOXHD1), mRNA P
NM_001145473.2 Homo sapiens lipoxygenase homology domains 1 (LOXHD1), transcript variant 3, mRNA P
NM_001145472.2 Homo sapiens lipoxygenase homology domains 1 (LOXHD1), transcript variant 2, mRNA PA
NM_001173129.1 Homo sapiens lipoxygenase homology domains 1 (LOXHD1), transcript variant 4, mRNA PA
BC041860.1 Homo sapiens lipoxygenase homology domains 1, mRNA (cDNA clone MGC:43678 IMAGE:5271046), complete cds PA

EST sequences (10 of 68) [Show all sequences]

AA994520.1 Clone IMAGE:1628992 mixed 3' read
AI611041.1 Clone IMAGE:2240902 uncharacterized tissue 3' read P
AI652668.1 Clone IMAGE:2307179 uncharacterized tissue 3' read P
AI696211.1 Clone IMAGE:2240854 uncharacterized tissue 3' read
CD244611.1 Clone IMAGE:30377777 testis 5' read
AW196588.1 Clone IMAGE:2686159 uncharacterized tissue 3' read P
BP370405.1 Clone TST05593 testis 5' read P
DR731345.1 Clone MGC8.5.1.1.1.G05 mixed P
DR731346.1 Clone MGC8.5.1.1.1.G05 mixed P
BF851359.1 lung P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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