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UGID:192032     UniGene Hs.337730     Homo sapiens (human)   LCMT1
Leucine carboxyl methyltransferase 1 (LCMT1)

Human protein-coding gene LCMT1. Represented by 351 ESTs from 174 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 192032 - Hs.337730]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001164891.1 PREDICTED: leucine carboxyl methyltransferase 1 isoform 3 P. troglodytes 100.0 333
NP_057393.2 LCMT1 gene product H. sapiens 100.0 333
XP_001099127.1 PREDICTED: leucine carboxyl methyltransferase 1 isoform 3 M. mulatta 99.7 333
NP_079580.2 leucine carboxyl methyltransferase 1 M. musculus 92.2 331
NP_001089458.1 leucine carboxyl methyltransferase 1 X. laevis 75.5 325
NP_001004645.1 lcmt1 gene product D. rerio 68.4 319
NP_609766.1 CG3793, isoform A D. melanogaster 52.3 306
Other hits (2 of 34) [Show all]SpeciesId(%)Len(aa)
XP_003916745.1 PREDICTED: LOW QUALITY PROTEIN: leucine carboxyl methyltransferase 1 P. anubis 98.5 346
XP_003124581.3 PREDICTED: leucine carboxyl methyltransferase 1-like isoform 1 S. scrofa 93.7 332

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; prostate; uncharacterized tissue; pituitary gland; intestine; liver; pancreas; lung; embryonic tissue; muscle; eye; blood; connective tissue; kidney; placenta; mixed; skin; mammary gland; pharynx; thymus; heart; ovary; adipose tissue; uterus; lymph node; thyroid; bladder; bone marrow; cervix; ear; trachea; bone; stomach; adrenal gland; tonsil; ascites; lymph; nerve; umbilical cord; vascular
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 16
Map position: 16p12.1
UniSTS entry: Chr 1 STS-N93765 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (12)

AL137283.1 Homo sapiens mRNA; cDNA DKFZp434C0816 (from clone DKFZp434C0816); partial cds PA
NM_016309.2 Homo sapiens leucine carboxyl methyltransferase 1 (LCMT1), transcript variant 1, mRNA P
AF037601.1 Homo sapiens leucine carboxyl methyltransferase (LCMT) mRNA, complete cds PA
AF151826.1 Homo sapiens CGI-68 protein mRNA, complete cds P
AK223364.1 Homo sapiens mRNA for leucine carboxyl methyltransferase variant, clone: FCC101G05 PA
AK025884.1 Homo sapiens cDNA: FLJ22231 fis, clone HRC01949 PA
NM_001032391.1 Homo sapiens leucine carboxyl methyltransferase 1 (LCMT1), transcript variant 2, mRNA P
BC001214.1 Homo sapiens leucine carboxyl methyltransferase 1, mRNA (cDNA clone MGC:682 IMAGE:3533656), complete cds PA
AK225271.1 Homo sapiens mRNA for leucine carboxyl methyltransferase 1 isoform a variant, clone: DMC05571 PA
BC014217.2 Homo sapiens leucine carboxyl methyltransferase 1, mRNA (cDNA clone MGC:20616 IMAGE:3959936), complete cds PA
AK291885.1 Homo sapiens cDNA FLJ76357 complete cds, highly similar to Homo sapiens leucine carboxyl methyltransferase 1 (LCMT1), mRNA PA
AK314409.1 Homo sapiens cDNA, FLJ95189, highly similar to Homo sapiens leucine carboxyl methyltransferase 1 (LCMT1), mRNA P

EST sequences (10 of 351) [Show all sequences]

R14248.1 Clone IMAGE:28431 brain 5' read P
AI004891.1 Clone IMAGE:1621071 testis 3' read A
AI024068.1 Clone IMAGE:1642851 testis 3' read A
R20384.1 Clone IMAGE:34958 brain 5' read
AI075378.1 Clone IMAGE:1682159 skin 3' read PA
AI074085.1 Clone IMAGE:1594271 intestine 3' read A
R20826.1 Clone IMAGE:31331 brain 5' read P
AI088211.1 Clone IMAGE:1693506 heart 3' read A
AI093107.1 Clone IMAGE:1694688 heart 3' read A
AA865097.1 Clone IMAGE:1371464 lymph node 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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