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UGID:190987     UniGene Hs.335393     Homo sapiens (human)   CHIC2
Cysteine-rich hydrophobic domain 2 (CHIC2)

Human protein-coding gene CHIC2. Represented by 109 ESTs from 71 cDNA libraries. Corresponds to reference sequence NM_012110.3. [UniGene 190987 - Hs.335393]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_083126.1 Chic2 gene product M. musculus 100.0 164
NP_001099206.1 Chic2 gene product R. norvegicus 100.0 164
XP_001363394.1 PREDICTED: cysteine-rich hydrophobic domain 2 protein-like M. domestica 100.0 164
XP_001089417.1 PREDICTED: cysteine-rich hydrophobic domain 2 protein isoform 1 M. mulatta 100.0 164
XP_001145791.1 PREDICTED: cysteine-rich hydrophobic domain 2 protein isoform 2 P. troglodytes 100.0 164
NP_036242.1 CHIC2 gene product H. sapiens 100.0 164
XP_001493551.1 PREDICTED: cysteine-rich hydrophobic domain 2 protein-like E. caballus 100.0 164
XP_003129031.1 PREDICTED: cysteine-rich hydrophobic domain 2 protein-like isoform 1 S. scrofa 100.0 164
NP_001071516.1 CHIC2 gene product B. taurus 100.0 164
XP_004009878.1 PREDICTED: cysteine-rich hydrophobic domain 2 protein O. aries 100.0 164
NP_001086533.1 cysteine-rich hydrophobic domain 2 X. laevis 97.0 165
NP_957414.1 chic2 gene product D. rerio 94.1 168
NP_733210.1 CG5938, isoform A D. melanogaster 73.2 167
NP_497227.1 Protein TAG-266, isoform a C. elegans 54.0 138
Other hits (2 of 27) [Show all]SpeciesId(%)Len(aa)
XP_420705.1 PREDICTED: cysteine-rich hydrophobic domain 2 protein isoform 2 G. gallus 99.4 164
XP_003205868.1 PREDICTED: cysteine-rich hydrophobic domain 2 protein-like M. gallopavo 99.2 124

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: testis; brain; ovary; uterus; skin; bone marrow; lung; blood; uncharacterized tissue; mixed; embryonic tissue; placenta; esophagus; spleen; trachea; stomach; thymus; connective tissue; mammary gland; kidney; eye; bone; pancreas; thyroid; prostate; intestine; lymph node; pharynx
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 4
Map position: 4q11
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (5)

AK130041.1 Homo sapiens cDNA FLJ26531 fis, clone KDN08812
NM_012110.3 Homo sapiens cysteine-rich hydrophobic domain 2 (CHIC2), mRNA PA
AF159423.1 Homo sapiens cysteine-rich hydrophobic 2 CHIC2 mRNA, complete cds P
AK312427.1 Homo sapiens cDNA, FLJ92770, Homo sapiens cystein-rich hydrophobic domain 2 (CHIC2), mRNA P
BC034691.1 Homo sapiens cysteine-rich hydrophobic domain 2, mRNA (cDNA clone MGC:21173 IMAGE:4747392), complete cds PA

EST sequences (10 of 109) [Show all sequences]

AA994157.1 Clone IMAGE:1628587 mixed 3' read P
AI028554.1 Clone IMAGE:1645575 testis 3' read A
CB052764.1 Clone IMAGE:3290734 uncharacterized tissue 5' read P
CB052763.1 Clone IMAGE:3290734 uncharacterized tissue 3' read PA
AI149829.1 Clone IMAGE:1751746 testis 3' read PA
AI249969.1 Clone IMAGE:2004487 pancreas 3' read A
AI290323.1 Clone IMAGE:1880639 mixed 3' read
AI363260.1 Clone IMAGE:2016025 brain 3' read P
AI423546.1 Clone IMAGE:2104914 brain 3' read P
AI651578.1 Clone IMAGE:2298879 kidney 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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