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UGID:190616     UniGene Hs.334772     Homo sapiens (human)   FAM175A
Family with sequence similarity 175, member A (FAM175A)

Human protein-coding gene FAM175A. Represented by 125 ESTs from 90 cDNA libraries. Corresponds to reference sequence NM_139076.2. [UniGene 190616 - Hs.334772]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001135565.1 PREDICTED: BRCA1-A complex subunit Abraxas isoform 4 P. troglodytes 100.0 408
NP_620775.2 FAM175A gene product H. sapiens 100.0 408
NP_765993.1 Fam175a gene product M. musculus 80.8 406
NP_001085339.1 BRCA1-A complex subunit Abraxas X. laevis 65.4 407
NP_001005993.1 fam175a gene product D. rerio 50.6 259
Other hits (2 of 19) [Show all]SpeciesId(%)Len(aa)
XP_003898721.1 PREDICTED: BRCA1-A complex subunit Abraxas P. anubis 98.5 408
XP_001116239.1 PREDICTED: BRCA1-A complex subunit Abraxas-like M. mulatta 95.8 211

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: testis; brain; uncharacterized tissue; embryonic tissue; bone marrow; intestine; mammary gland; uterus; skin; blood; thyroid; vascular; prostate; mixed; lymph node; placenta; adrenal gland; kidney; mouth; spleen; bladder; thymus; liver; trachea; larynx; salivary gland; lung; muscle; eye; ascites; connective tissue; bone; pancreas; heart; parathyroid
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 4
Map position: 4q21.23
UniSTS entry: Chr 4 G30051
UniSTS entry: Chr 4 RH103362
UniSTS entry: Chr 1 L17971
UniSTS entry: Chr 1 L17705
UniSTS entry: Chr 1 D1S1425
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (7)

AY358576.1 Homo sapiens clone DNA56410 EGES496 (UNQ496) mRNA, complete cds PA
AK022704.1 Homo sapiens cDNA FLJ12642 fis, clone NT2RM4001965 P
AK023676.1 Homo sapiens cDNA FLJ13614 fis, clone PLACE1010857 P
EF531340.1 Homo sapiens abraxas protein (ABRA1) mRNA, complete cds P
BC016905.1 Homo sapiens family with sequence similarity 175, member A, mRNA (cDNA clone IMAGE:4392057), complete cds A
NM_139076.2 Homo sapiens family with sequence similarity 175, member A (FAM175A), mRNA PA
BC039573.1 Homo sapiens family with sequence similarity 175, member A, mRNA (cDNA clone MGC:48664 IMAGE:6045433), complete cds PA

EST sequences (10 of 125) [Show all sequences]

AA905493.1 Clone IMAGE:1506958 mixed 3' read PA
AI024776.1 Clone IMAGE:1631463 mammary gland 3' read
AI033738.1 Clone IMAGE:1647626 parathyroid 3' read A
BX089041.1 Clone IMAGp998N143513_;_IMAGE:1391437 testis P
CB135111.1 Clone L14ChoiCK0-19-H06 liver 5' read P
CB135704.1 Clone L14ChoiCK0-30-F08 liver 5' read P
AI452418.1 Clone IMAGE:2145209 mixed 3' read A
AI472709.1 Clone IMAGE:2044067 lymph node 3' read
AI401376.1 Clone IMAGE:2113591 mixed 3' read A
AI669805.1 Clone IMAGE:2252674 prostate 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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