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UGID:180773     UniGene Hs.298602     Homo sapiens (human)   RTL1
Retrotransposon-like 1 (RTL1)

Human protein-coding gene RTL1. Represented by 7 ESTs from 7 cDNA libraries. Corresponds to reference sequence NM_001134888.2. [UniGene 180773 - Hs.298602]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001128360.1 RTL1 gene product H. sapiens 100.0 1357
NP_908998.1 Rtl1 gene product M. musculus 63.4 1060
Other hits (2 of 9) [Show all]SpeciesId(%)Len(aa)
XP_520846.3 PREDICTED: LOW QUALITY PROTEIN: retrotransposon-like 1 P. troglodytes 99.0 1358
XP_001110319.1 PREDICTED: retrotransposon-like protein 1-like M. mulatta 96.5 1358

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: muscle; uncharacterized tissue; mixed; brain; placenta; connective tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 14
Map position: 14q32.2
UniSTS entry: Chr 14 MARC_10877-10878:993140164:1
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (2)

NM_001134888.2 Homo sapiens retrotransposon-like 1 (RTL1), mRNA P
BC150617.1 Homo sapiens retrotransposon-like 1, mRNA (cDNA clone MGC:183527 IMAGE:9056987), complete cds P

EST sequences (7)

AI338830.1 Clone IMAGE:1933851 mixed 3' read P
BE294363.1 Clone IMAGE:3528405 muscle 5' read P
BE464485.1 Clone IMAGE:3208284 uncharacterized tissue 3' read P
BF697079.1 Clone IMAGE:4286107 brain 5' read
BF514033.1 Clone IMAGE:3071421 uncharacterized tissue 3' read P
BI050227.1 placenta
AA378254.1 connective tissue 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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