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UGID:180719     UniGene Hs.298345     Homo sapiens (human)   SLBP
Stem-loop binding protein (SLBP)

Human protein-coding gene SLBP. Represented by 329 ESTs from 167 cDNA libraries. Corresponds to reference sequence NM_006527.2. [UniGene 180719 - Hs.298345]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_006518.1 SLBP gene product H. sapiens 100.0 269
NP_001233401.1 SLBP gene product P. troglodytes 99.6 269
NP_033219.1 histone RNA hairpin-binding protein M. musculus 92.7 274
NP_001243122.1 stem-loop binding protein isoform 1 D. rerio 72.0 243
NP_001085875.1 MGC80972 protein X. laevis 67.4 242
Other hits (2 of 17) [Show all]SpeciesId(%)Len(aa)
XP_003890952.1 PREDICTED: histone RNA hairpin-binding protein isoform 1 P. anubis 97.7 344
XP_001488429.2 PREDICTED: histone RNA hairpin-binding protein-like E. caballus 95.9 217

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: testis; brain; placenta; uncharacterized tissue; embryonic tissue; lung; kidney; uterus; prostate; mixed; eye; intestine; adipose tissue; skin; lymph node; connective tissue; bladder; heart; ganglia; larynx; cervix; ascites; pancreas; blood; liver; mammary gland; ovary; vascular; thyroid; stomach; spleen; bone; muscle; thymus; lymph; parathyroid
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 4
Map position: 4p16.3
UniSTS entry: Chr 4 WI-11359 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (11)

BT007433.1 Homo sapiens stem-loop (histone) binding protein mRNA, complete cds P
NM_006527.2 Homo sapiens stem-loop binding protein (SLBP), mRNA PA
Z71188.1 H.sapiens mRNA histone RNA hairpin-binding protein P
BC015703.1 Homo sapiens stem-loop binding protein, mRNA (cDNA clone MGC:10175 IMAGE:3907984), complete cds PA
BC014908.1 Homo sapiens stem-loop binding protein, mRNA (cDNA clone MGC:17041 IMAGE:3908584), complete cds PA
AK315635.1 Homo sapiens cDNA, FLJ96722, Homo sapiens stem-loop (histone) binding protein (SLBP), mRNA P
AK094257.1 Homo sapiens cDNA FLJ36938 fis, clone BRACE2005434, highly similar to Histone RNA hairpin-binding protein P
AK093314.1 Homo sapiens cDNA FLJ35995 fis, clone TESTI2014979, highly similar to Histone RNA hairpin-binding protein P
AK091735.1 Homo sapiens cDNA FLJ34416 fis, clone HEART2006310, highly similar to Histone RNA hairpin-binding protein P
AK300826.1 Homo sapiens cDNA FLJ58426 complete cds, highly similar to Histone RNA hairpin-binding protein P
U75679.1 Human histone stem-loop binding protein (SLBP) mRNA, complete cds PA

EST sequences (10 of 329) [Show all sequences]

AA988612.1 Clone IMAGE:1604697 lung 3' read A
AI022315.1 Clone IMAGE:1652268 mixed 3' read A
AI033592.1 Clone IMAGE:1656206 mixed 3' read A
AI222744.1 Clone IMAGE:1925303 intestine 3' read A
AI265993.1 Clone IMAGE:1891792 placenta 3' read A
CB159649.1 Clone L18POOL1n1-25-C09 liver 5' read
AI224054.1 Clone IMAGE:2000706 lymph node 3' read A
AI278948.1 Clone IMAGE:1912096 intestine 3' read A
AI280681.1 Clone IMAGE:1990636 uterus 3' read A
AI288393.1 Clone IMAGE:1988355 uterus 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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