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UGID:131318     UniGene Hs.2909     Homo sapiens (human)   PRM1
Protamine 1 (PRM1)

Human protein-coding gene PRM1. Represented by 173 ESTs from 19 cDNA libraries. EST representation biased toward testis; adult. Corresponds to reference sequence NM_002761.2. [UniGene 131318 - Hs.2909]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_002802231.1 PREDICTED: procollagen-lysine,2-oxoglutarate 5-dioxygenase 1-like M. mulatta 95.4 87
NP_000293.2 PLOD1 gene product H. sapiens 95.4 87
NP_035252.1 Plod1 gene product M. musculus 90.8 87
Other hits (2 of 14) [Show all]SpeciesId(%)Len(aa)
XP_001142788.1 PREDICTED: procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 isoform 7 P. troglodytes 94.2 87
XP_004014056.1 PREDICTED: procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 O. aries 94.2 87

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: testis [show more like this]
adult [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: testis; brain; placenta; uncharacterized tissue; mixed
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 16
Map position: 16p13.2
UniSTS entry: Chr 16 PMC124363P1
UniSTS entry: Chr 16 SHGC-12701 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

BT006746.1 Homo sapiens protamine 1 mRNA, complete cds
NM_002761.2 Homo sapiens protamine 1 (PRM1), mRNA A
AY651260.1 Homo sapiens testis specific protamine 1 (P1) mRNA, complete cds
BC003673.1 Homo sapiens protamine 1, mRNA (cDNA clone MGC:12307 IMAGE:3935638), complete cds A
AK311987.1 Homo sapiens cDNA, FLJ92260, Homo sapiens protamine 1 (PRM1), mRNA
Y00443.1 Human testis specific mRNA for protamine 1 (P1)

EST sequences (10 of 173) [Show all sequences]

AA961850.1 Clone IMAGE:1600350 uncharacterized tissue 3' read A
AA975230.1 Clone IMAGE:1588416 uncharacterized tissue 3' read A
BX101249.1 Clone IMAGp998O074057_;_IMAGE:1600350 uncharacterized tissue A
AI357236.1 Clone IMAGE:2006004 uncharacterized tissue 3' read A
AI699590.1 Clone IMAGE:2241100 uncharacterized tissue 3' read A
AL036195.2 Clone DKFZp564G172 brain 5' read A
AL079828.1 Clone DKFZp434C1831 testis 5' read P
BX330508.2 Clone CS0DI058YE03 placenta 3' read
BX340233.2 Clone CS0DI084YA14 placenta 5' read
BX338991.2 Clone CS0DI066YI06 placenta 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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