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UGID:178518     UniGene Hs.289105     Homo sapiens (human)   SSX2
Synovial sarcoma, X breakpoint 2 (SSX2)

Human protein-coding gene SSX2. Represented by 29 ESTs from 11 cDNA libraries. EST representation biased toward skin tumor. Corresponds to reference sequence NM_001164417.1. [UniGene 178518 - Hs.289105]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_003317517.1 PREDICTED: protein SSX2-like isoform 2 P. troglodytes 99.5 187
NP_003138.3 SSX2 gene product H. sapiens 98.2 222
Other hits (SpeciesId(%)Len(aa)
XP_002806268.1 PREDICTED: protein SSX2-like isoform 3 M. mulatta 85.6 222
XP_003917712.1 PREDICTED: protein SSX5-like P. anubis 84.0 186

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: skin tumor [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: skin; liver; uterus; placenta; testis; mixed; brain
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: X
Map position: Xp11.22
UniSTS entry: Chr X STS-Z49105
UniSTS entry: Chr X STS-H99655 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (2)

X86175.1 H.sapiens mRNA for SSX2 protein P
NM_001164417.1 Homo sapiens synovial sarcoma, X breakpoint 2B (SSX2B), mRNA PA

EST sequences (10 of 29) [Show all sequences]

CB143725.1 Clone L16HLK3-17-C12 liver 5' read P
CB156144.1 Clone L18POOL1n1-2-B04 liver 5' read P
CB158955.1 Clone L18POOL1n1-32-F07 liver 5' read P
AL040237.1 Clone DKFZp434I1413 testis 5' read P
CV026298.1 mixed 5' read P
CV027202.1 mixed 5' read P
BE384545.1 Clone IMAGE:3618947 skin 5' read P
BE387586.1 Clone IMAGE:3615133 skin 5' read P
BE390290.1 Clone IMAGE:3607051 uterus 5' read P
BE391023.1 Clone IMAGE:3607495 uterus 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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